Results for "usage"
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Comment on "Benchmarking Perl Module !"
Benchmarking a Perl module involves measuring the performance of the module in terms of its execution time and memory usage. This can be done using the Perl Bench...427 days ago
- Usage Summary Produce help page. Quickly check the software usage and available command line options....
1113 days ago
Comment on "Sibelia: A comparative genomics tool"
Basic usage =========== In this manual it is assumed that "Sibelia" is properly install...rameters set can be used for analysis of distantly-related genomes. However, usage of this set requires more com...1297 days ago
- ➜ bin git:(master) ✗ ./canu usage: canu [-version] [-citation] \ [-correct | -trim | -assemble | -trim-assemble] \ [-s <assembly-specifications-file>] \ -p <assembly-prefix...
2111 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
➜ LAMSA git:(master) ./lamsa aln Usage: lamsa aln [options] <ref.fa> <read.fa/fq> Algorithm o...ut [STR] Output file (SAM format). [stdout] -h --help Print this short usage. -H --HELP Print a detailed u...2135 days ago
- ...it:(master) ✗ ./mashmap -h-----------------Mashmap is an approximate long read or contig mapper based on Jaccardsimilarity-----------------Example usage:$ mashmap -r ref.fa -q seq.fq...
2135 days ago
- ...is can get tough if your cluster has a non-standard configuration. Run canu without any options to get help: canu This produces: usage: canu [-version] \...
2187 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...ing and Computing (3) Genome Institute of Singapore, A*STAR, Singapore Usage: graphmap [options] -r <reference_file> -d <reads_file> -o <output_sam_path> Usage: graphmap [options] Options...2304 days ago
- Common usage SPAdes: de Bruijn graph based assembler The last assembler we will run is SPAdes. SPAdes is different from the other assemblers in that it genera...
2356 days ago
- ...eSCF, I tried to install it but got the following error bio@bio214b[geneSCF-master-source-v1.1-p2] ./prepare_database [] prepare_database USAGE: ./prepare_database -db=[GO_...
2570 days ago
