Results for "variable"
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...Its memory consumption is around 5Gb for 100M reads. KisSplice is not a full-length transcriptome assembler. This means that it will output the variable regions of the transcripts, n...2832 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
...l fitness can be jointly determined by different types of loci under selectinon, such as QTLs coding for quantitative traits under spatially variable selection, universally delete...2786 days ago
- ...pull git submodule update --init make It is also convenient to add the location of progressiveCactus/bin to your PATH environment variable. In order to run the included...
2678 days ago
- ...nd uncalled bases. The assembler reads two files in FASTQ format with quality information. If amplification primers were used (e.g., to isolate a variable region of the 16S gene, or th...
2672 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...hes across hundreds of samples, sometimes conducted across several different institutions. For such studies, Strand NGS v3.1 includes confounding variable analysis to eliminate technic...2400 days ago
Perlbrew: admin-free perl installation management tool.
...eeds to be executed. The default perlbrew root directory is ~/perl5/perlbrew, which can be changed by setting PERLBREW_ROOTenvironment variable before the installation and i...2502 days ago
Alien_Hunter : prediction of putative Horizontal Gene Transfer (HGT) events
...tal Gene Transfer (HGT) events with the implementation of Interpolated Variable Order Motifs (IVOMs). An IVOM approach exploits compositional biases using variable order motif distributions and...2323 days ago
- SRBreak is a read-depth and split-read package written in R for identifying copy-number variants in next-generation sequencing datasets. Note: SBReak was designed to...
2195 days ago
iSeqQC: a tool for expression-based quality control in RNA sequencing
iSeqQC, an expression-based QC tool that detects outliers either produced due to variable laboratory conditions or due to dissimilarity within a phenotypic group. iSeqQC implements var...1553 days ago
DADA2: Fast and accurate sample inference from amplicon data with single-nucleotide resolution
...sp;ITS-specific version of the DADA2 workflow identifies and verifiably removes primers on both ends of each ITS read, a key step due to the variable length of the ITS region. Sh...1285 days ago
