Results for "variant analysis"
Top-level pages
...f applications, but no single analysis pipeline can be used in all c...e major steps in RNA-seq data analysis, including experimental desig...ernative splicing, functional analysis, gene fusion detection and eQ...ene and transcript expression analysis of RNA-seq experiments with T...2352 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the...and provides detailed annotation and pathway analysis. Takes several hours per geno...u want to do functional profiling and pathway analysis of your genome(s)… whi...2333 days ago
List of visualization tools for network biology
...om/articles/sections/networks-analysis. Following are the list of...icient integrated multi-level analysis of microarray, sequence, regu...Igraph Collection of network analysis tools with the emphasis on ef...Automatic reconstruction and analysis of biological networks and Pe...2289 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for...final results but also for improving analysis protocols, testing data quali...ng result drafts. Its integration in analysis pipelines allows the optimiza...ion tools, which could be useful for analysis and interpretation of re...2285 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as giving experience...2282 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact...nerated increasing interest in developing new methods for their computational analysis. Following are the list of...2275 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologists to...very intuitive workflow for the analysis and visualization of RNA-Seq...gnment, Differential expression analysis, Splicing events and gene fus...pports large scale RNA-Seq data analysis too. The tool also supports b...2265 days ago
Python learning resources for bioinformatics and computational biologist !
Python is a general-purpose language, which means it can be used to build just about...libraries. Professionally, Python is great for backend web development, data analysis, artificial intelligence, and...2256 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint rea...using-bedtools-and-r/ Eval: A software package for analysis of genome annotations | BMC B...mur.be/SOGo/so/jnarayan/Mail/view Tetra-Nucleotide Analysis (TNA) | BIOiPLUG Help center...2243 days ago
My commonly used commands in Bioinformatics
FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them in...close this issue (or keep it open if you still want to implement some kind of variant...2111 days ago
