Results for "velvet"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...-throughput sequencing datasets with non-uniform coverage. Medvedev et al., Bioinformatics 27(13):i137-41, 2011. PubMedCentral De novo assembly Velvet: algorithms for de novo short...3777 days ago
Commercial and public next-gen-seq (NGS) software
...the SOAP suite. See above. VCAKE - De novo assembly of short reads with robust error correction. An improvement on early versions of SSAKE. Velvet - Velvet is a de novo genomic assemble...3516 days ago
Software packages for next gen sequence analysis
...SOAP suite. See above. * VCAKE - De novo assembly of short reads with robust error correction. An improvement on early versions of SSAKE. * Velvet - Velvet is a de novo genomic assemble...3240 days ago
Bioinformatics tools for genome assembly !
...ll bacterial genomes, as well as small eukaryotic genomes. ABySS: A parallelized assembler for large genomes that uses de Bruijn graphs. Velvet: Another de Bruijn graph-base...284 days ago
Mitochondrial genome assembly tools !
...mbler) is another de novo assembly tool that can be used for mitochondrial genome assembly, especially in cases with relatively low coverage. Velvet: Velvet is a de novo assembly tool th...240 days ago
