Install BLAST in Ubuntu/Linux and Window !
...wnload ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-win64.exe with your web browser. #If that FTP links does not work, try HTTP instead http://ftp....1156 days ago
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2703 days ago
Create genome scaffolding with Perl
...($seq) = @_; $seq =~ tr/ACGTUYRSWMKDVHBXN-/TGCAARYSWKMHBDVXN-/; # work on masked sequences as well...d); ## Only continue on if there's a good likelihood that this will work ## i.e. trimLength * (1-...2318 days ago
Install Python locally on shared Linux server !
...source following its guideline ./configure --prefix=$HOME/python make && make install #Notice the prefix option, it is mandatory for this to work. The value of prefix option i...2108 days ago
2085 days ago
Perl script to delete the adjacent repeats !
...aring, you could use: $string =~ s/(.)\1/$1/gi #And finally, if you wanted to trim any number of duplicates down to a single letter, this would work: $string =~ s/(.)\1+/$1/gi1560 days ago
1451 days ago