BOL

alternative splicing analysis from RNA-Seq !http://biorxiv.org/content/early/2014/09/04/008763 #AS #RNA-Seq

Analysis of methylation array data! http://www.bioconductor.org/packages/devel/bioc/html/missMethyl.html #Meth-Seq

http://mygene.info/ #Gene #Annotation

http://gigadb.org/dataset/100102 #Nanopre #MinION #data

Surviving your PhD write-up http://people.cs.kuleuven.be/~dave.clarke/phd.html #PhD #WriteUp #Thesis

https://nanoporetech.com/news/movies #Nanopore #Application

https://onecodex.com/ - search engine for genomic data #GenomeSearch

Pathway Analysis tools ! http://cdwscience.blogspot.de/2013/03/bioinformatics-101-pathway-analysis.html #Pathways #KeGG #Reactome #GO

http://www.timesofisrael.com/scientists-discover-how-disruptive-genetic-rna-is-made/ #Expression #RNA

Search a PATTERN in a file and print the line. perl -ne '/PATTERN/ && print' fileName #Perl #Pattern #Print #Search #Line

MAP2: multiple alignment of syntenic genomic sequences http://nar.oxfordjournals.org/content/33/1/162.full #Alignment #Synteny #Sequence

Smart comment module in perl http://search.cpan.org/~dconway/Smart-Comments-1.000005/lib/Smart/Comments.pm #Perl #Comments #Smart #ProgressBar

Sequential number arrays @arrayVal = (1 .. 10); #Perl #Array #Sequential

eMatchSite: Sequence Order-Independent Structure Alignments of Ligand Binding Pockets in Protein Models http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003829 #Protein #Binding

Dynamic Large-Scale Chromosomal Rearrangements Fuel Rapid Adaptation in Yeast Populations http://www.plosgenetics.org/article/info%3Adoi%2F10.1371%2Fjournal.pgen.1003232 #Chromosome #Evolution