Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programme...mes with a genuinely useful standard library that can itself be implemented in C, and it is both efficient and portab...y to use the C++ libraries of biology. These library are design...nt-driven Optmizer interface (works wi...3938 days ago
3912 days ago
Introduction to Bioinformatics
Bioinformatics (Genomics) Biocomputing in a Nutshell. Biologist's Guide to Internet Resources Computational Molecular Biology Course Course on Bioinformat...urse documents Principles of Computational Biology, Steven Salzberg. Principles...Genomic Era Protein sequence and stru...3912 days ago
Virtual Bioinformatics Online Tutorial
There are several vitual online bioinformatics training centres. Here I p...icsNational University of Ireland , Ireland UNIX, GCG, SEQLAB and STADEN Tut...puting course Algorithms for Computational Biology (Advanced Topics #6, 2366...Technology CSE 590BI - Computational Biology, University...3912 days ago
Keep Your Important SSH Session Running when You Disconnect from Server !!!
As a Bioinformatician/ Computational biologist we swim in the oc...an of genomic/proteomics data, and play with them with an ease..../10.04/serverguide/byobu.html) and other commands (disown -a &am...iple terminal sessions running and easily switch between them. I...ing screen sessionHit Ctrl + A and then...3694 days ago
Check Linux server configuration !!
Bioinformatician uses servers for computational analysis. Sometime we need...ols. Here I am showing some basic commands using them you can gather th...server you can use the following commands:- =====================...nbsp; 2048 kBTo check the model and seri...3643 days ago
A guide for complete R beginners :- Getting data into R
For a beginner this can be is the hardest part, it is also the mo...x with the numbers between 1 and 5. You can see what is in an...olumn mydata header=T also works Note that there is a com...is is separated only by tabs and has a header mydata Re...will still work with our file and give...3348 days ago
A guide for complete R beginners :- Installing R packages
Part of the reason R has become so popular is the vast array of p...r. We just fire up an R shell and type:> install.packages("g...er: if you are using Linux and don’t have root access,...e .Renviron in our home area, and add the line R_LIBS=/data/Rpa...")> library(ggplot2) just works!...3348 days ago
Genome Assembly Tools and Software - PART2 !!
...our assembly. For the sake of computational memory saving and convenience of data inquiry,...sequence reads in a SAM file and a set of variant calls in VCF...s, correcting sequence errors and transferring annotation. Sho...BAM format / RNA-Seq Assembly and Analysis SAMMate is an...2676 days ago
Awesome perl frameworks, libraries and software - PART 2
licheng/gccfilter - gccfilter is a perl filter to colorize and simplify (or expand) gcc diagnostic messages. gccfi.../perl6-bench - Benchmark and compare Perl 6 implementations...e written to a separate named worksheet in the Excel spreadsheet. The worksheet name will be the name o...2485 days ago