Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to ana...r to interact with biotech researchers and learn how do they explain their one graph (which they generally produce...3941 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge a...at you need in your analysis is already coded into the program. Need to plot a graph? Just click this button right...3699 days ago
3931 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biolo...ed or ordered lists of genes, visual browsing of GO graph structure, interactive visual...semantic similarity-based scatterplots, interactive graphs, or tag clouds. http://revi...3701 days ago
2521 days ago
String graph based genome assembly software and tools !
In graph theory, a string graph is an intersection graph of...approach called ‘string graph’. Following are the ge...most assemblers, which are de Bruijn graph based, SAGE uses the string-o...ou want to learn about String Graph assembler, please read the fo...2320 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...reedy, overlap-layout-consensus (OLC), de Bruijn graph (DBG), and string graph. List of analysis tools deve...tps://github.com/marbl/canu FalconString graph, Celera OLC Falcon correctorh...ariokostelac/ra-integrate/ ALLPATHS-LGde Bruijn graph ALLPATHS-L correctorht...2312 days ago
Installing Bandage on Ubunty !
...ro blast build_scripts command_line COPYING graph images ogdf program README.md...namedialog.h/home/urbe/anaconda3/bin/uic ui/graphinfodialog.ui -o ui_graphinfodi...settings.o globals.o graphlayoutworker.o debruijnnode.o debruijnedge.o graphicsitemnode.o gra...2180 days ago
CANU genome assembly parameters !
Choose the appropriate parameters to run Canu and run it. The assembly will take abou...ead inclusion in the final assembly *.gfa : file containing the assembly graph by Canu *.contigs.fasta ...1936 days ago
Software for genome assembly !
List of bioinformatics tools/Software Website References for genome assembly: 1 Falc...lon/wiki 9 BUSCO single copy gene markers http://busco.ezlab.org/ 10 Bandage graph assembly viewer https://rrwic...1335 days ago