Results for "Deletions"

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  • DIAL

    ...ce genome. DIAL works even when the depth of coverage is insufficient for de novo assembly, and it can be extended to determine small insertions/deletions. Our main motivation is to us...

    148 days ago

  • Stampy

    ...s in the mapping of reads containing that contain sequence variation relative to the reference, in particular for those containing insertions or deletions.

    432 days ago

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News

  • Scalpel

    A team from Cold Spring Harbor Laboratory has released an algorithm, called Scalpel, for finding insertions and deletions in next generation sequencing data sets. Scalpel, which is ope...

    1072 days ago

ResearchLabs posts

  • The Mills lab

    ...ncluding: (i) paired-end mapping (or read pair analysis) based on abnormally mapped pairs of clone ends; (ii) read-depth analysis, which detects deletions and duplications through anal...

    518 days ago

Tags

  • Structural variation: the hidden genomic treasure

    Genome re-sequencing projects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and short indels. Structural Variations (SVs) and Copy Number Variations (CNVs) are a major source of genomic variation. However, compar...

    Tags: Bioinformatics, Chromosome, Genome, NGS, Structure Variation, Deletions, Insertions, Duplications, Inversions, Translocations

    228 days ago