3161 days ago
Important Journals, Blogs and Forums for Bioinformaticians
...y digest of scientific microbiome papers, by Elisabeth Bik, Science Editor at uBiome. Living in an Ivory Basement: Titus Brown’s blog on metagenomics, open science, testing, repro...2633 days ago
Illumina based assembly pipeline steps !
...ant calling and consensus sequence generation routes (iVar variants and consensus; default for amplicon data || BCFTools, BEDTools; default for metagenomics data) Variant annotation (...868 days ago
Next Generation Sequencing (NGS) Tutorials
...oolkit for Genome Analysis http://www.broadinstitute.org/gatk/ Metagenomics:http://www.nbic.nl/education/nbic-phd-school/course-schedule/ngsmetagenomics/ RNASeq:http://www.nbic.nl/e...3478 days ago
Orione – a web-based framework for NGS analysis in microbiology
...e novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the construction of...nities for data-intensive computational analyses in microbiology and metagenomics. Reference Cuccuru G1, Orsi...3565 days ago
Genome Assembly Tools and Software - PART2 !!
...mbly of GEnomesSAGE is a new string-overlap graph-based de novo genome assembler. Omega 1.0.2 – Overlap-graph de novo Assembler for MetagenomicsOmega is a software for a...2676 days ago
Bioinformatics in Africa: Part2 - Kenya
...evelopment of Bioinformatics Data Management Systems 6. Gene Mining 7. High Throughput Genotyping 8. Microarray data management and analysis 9. Metagenomics 10. Immunoinformatics 11. Hos...1174 days ago
List of bioinformatics open source projects/software.
...earchers, and scientists. AMPHORA ("AutoMated Phylogenomic infeRence Application") http://wolbachia.biology.virginia.edu/WuLab/Software.html Metagenomics analysis software Anduril h...3747 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ant calling and analysis of NGS data Supported workflows include: reference-guided and de novo genome and transcriptome assembly and analysis, metagenomics sample assembly, targeted res...2899 days ago
Postdoctoral position in bioinformatics @ Sweden
...stiansson’s research group. We are focused on methods development for and analysis of next generation DNA sequencing, in particular comparative metagenomics and gene expression analysis...3938 days ago
4 positions in high throughput computational metagenomics and systems biology of natural products
...positions in high throughput computational metagenomics and systems biology of natura...the areas of high throughput computational metagenomics and systems biology of natura...-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natura...3902 days ago
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Metagenomics role in antibiotic resistance
Related latest article: http://www.nature.com/nature/journal/v509/n7502/pdf/nature13377.pdfTags: metagenomics, antibiotics resistant, sequencing
3616 days ago
Fancy Oneliner for Bioinformatics !!
This webpage lists some of the one-liners that we frequently use in metagenomic analyses. You can click on the following links to browse through different topics. You can copy/paste the commands as they are in your terminal screen, provided you follow the same naming conventions and folder struct...Tags: Bioinformatics, Analysis, Visualization, SAM, BAM, Oneliner, NGS, metagenomics
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