Results for "NGS data analysis"
Users
Skills: NGS data analysis1353 days ago
- Brief description: ArrayGen's focus on Genomics, NGS data analysis, custom array design, microarray data analysis thus cover a vast majority of Bioinformatics applications in the life sciences sector.
2700 days ago
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Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several...or the rescue. Dont worry biological data cruncher, this is true we are...r the configuration to save the settings.# cpanSorry, we have to rerun...tstart or never)? [atstart]Cache metadata (ye...3941 days ago
Five unique traits of effective computational biologist
...ipts, and tools to analyse gigantic biological data. Being a great biological pr...s only learn new technical or non-technical things when it’s absolutely nec...etting a solution. Learn to perform root cause analysis, learn enough about the under...3941 days ago
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Bookmarks
List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3936 days ago
- Bioinformatics is developing very rapidly. With new tools and software it is, now a days, easy to analyse the large scale genomics datasets. But we need to understan...e background of software/tool to better explain the data com...
3936 days ago
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Files
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We...3944 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha heli...ire topology for 77% of the sequences in a standard dataset of 86 proteins with superv...atlab Conclusion/Implementation: Here discriminant data min...3936 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used...st to Bio-informatics work that is math heavy and deals with a large amount of data.3943 days ago
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing...rised MinION™ device. These are a new generation of electronic molecular analysis system for use in scientific...3804 days ago
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Pages
Bio++ : C Language libraries for your biological need
...aries are as follows:Sequence analysis Sequence and Site object...and molecular evolution Data structure and IO Phylogenetic tr...Function objects).Statistics: DataTable object, with I/O from CSV fi...of C++ libraries for sequence analysis, phylogenetics, molecular evo...3939 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinf..., Gene Ontology(Bio::GO), PDB (Bio::PDB), FANTOM database(Bio::FANTOM), GFF (Bio::GFF)...3938 days ago
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Top-level pages
- ...roughput next generation sequencing” (HT-NGS). The decreasing genome seque...ic sequencing projects. In the fast growing HT-NGS technologies, the main challenge is to cope with the analysis of vast production of sequencing database through advanced bioinformati...
3939 days ago
- ...collection, organization and analysis of large amounts of biological data, using networks of computers and databases." - from the glossary fo...of protein domains. Combined analysis of structural and genomic data will certainly get more important...
3938 days ago
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Wire posts
News
- InterpretOmics, a big data analytics startup that focuses on life sciences, has received angel funding of around Rs 10 crore from a group of investors including Singapore's information technology and shipping company, Amarante. http://www.interpretomics.co/
3911 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw infor...list we display its behaviour in the experiment alongside w...3931 days ago
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Opportunity posts
NGS & Bioinformatics Summit Europe
NGS & Bioinformatics Summit Europe Conference 7th to 8th October 2013 Ber..., Germany Website: https://www.gtcbio.com/conference/ngse...: Kristen Starkey We welcome you to join us at GTC’s NGS &...3940 days ago
Structural polymorphism analysis from NGS data
...cian to analyze Next Generation Sequencing (NGS) data analysis. In the context of a flag...s in order to ensure compliance of produced datasets with pipelines requiremen...s computational facilities and expertise in NGS data analysis, and will benefit as well fro...3940 days ago
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ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. Our...s, with an emphasis on mitosis. We develop in-vitro assays, quantitative image analysis and cytosim, a computer simul...
3940 days ago
- Melanie Bahlo is an applied statistician working in the areas of statistical geneti...pedigrees Investigation of DNA sharing in distantly related individuals CNV analysis in pedigrees and connections...
3939 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this...Gene se Genome tak. Maine BLAST kiya. NCBI wale Data le jayenge Raju ban ga...To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Database...3910 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to change the b...mes. I'm BioGeek. Fedup with LIPS, try God script. Idiot, Go ahead, make my data! T...3711 days ago
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Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st C...ry: Making Sense out of Massive Data Air date: Wednesday...rease in genomic and biomedical data, which will soon outstrip adv...r to perform current methods of analysis. Extracting new science from these massive datasets will require not only faster...3893 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genom...Bacillus subtilis. Until now, genome analysis could only be done in nat...sequencer development has made genome analysis possible in an ordinary lab....y understanding their personal genome data. So, I think it's amply possible...3908 days ago
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Bio-Scripts
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1208 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has...ad().split("\n")[1:] allseq[nm] = ''.join(dna) import json with open("data/all...1127 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a pr...basically want to do de-novo assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Wh...3522 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3517 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinf...ome, proteome, and metabolome analysis to reveal the molecular p...seful tools for comprehensive analysis and comparison of high-throughput experimental data in an integrated manner and besid...With the increasing amount of data in databases, there is already a...2353 days ago
Groups
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It...3894 days ago
R is a free software programming lang...dely used among statisticians and data miners for developing statistical software and data analysis. R's popularity has incre...oconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statisti...3942 days ago
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Tags
- https://sites.google.com/site/seqomics/home http://about.me/vibes100
Skills: NGS data analysis, Bioinformatics, Programming, Machine learning, MV data analysis
1353 days ago
- A Computational biologist, currently investigating the impact of transposable elements on the adaptation of the rice genome under fungal pathogen challenges and genome duplication. Experienced in using next-generation sequencing technologies like shotgun sequencing, linked reads, and long-read se...
Tags: NGS data analysis
1131 days ago
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Comments
- ...amples into a single report. NGSQC NGSQC: cross-platform quality analysis pipeline for deep sequenc...t generation sequencing (NGS) data, consisting of both raw reads qua...supports Ion Torrent and 454 data. Trim galore! Trim_galore&n...
2128 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
...UK Cambridge Bioinformatics core facility HarvardX Biomedical Data Science Open Online Training...CBioinformatics Bioinformatics Crash Course Next-Gen Sequence Analysis Workshop (2013) R and NGS tutorial Bioinformatics Resources...2312 days ago
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