Results for "Scripts"
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I bet, this website will be your best friend in near future. This helps us to explore the existing open source codes and learn from it. You can find some useful open source bioinformatics codes for your analysis work. You can use the left bar options to filtere out or narrow down your search res...Tags: Koders, Coders, Bioinformatics Scripts, Open Source Codes, Computational Biology, Scripts, Search, Code Search
3912 days ago
- Over the years most bioinformatics people amass a collection of small utility scripts which make their lives easier. Too often they are kept either in private repositories or as part of a public collection to which noone else can contribute. Biocode is a curated repository of general-use utility ...
Tags: Bioinformatics, Computational Biology, Scripts, Codes, Programs, BioScripts, BioCodes, Examples
3662 days ago
R programming and Jobs website
Welcome to the R Jobs section of ProgrammingR.com. If your organization has an R employment opportunity that you would like to have posted here, submit it via the contact page. Prospective employees: use the contact information provided in the position listing to apply or contact the hiring organ...Tags: Bioinformatics, Computational Biology, R, Genomics, R Programming, Scripts, Jobs, Opportunity
3629 days ago
Stand-alone programs for Bioinformatician
This directory contains applications for stand-alone use, built specifically for a Linux 64-bit machine. For help on the bigBed and bigWig applications see:http://genome.ucsc.edu/goldenPath/help/bigBed.htmlhttp://genome.ucsc.edu/goldenPath/help/bigWig.html View the file 'FOOTER' to see the usag...Tags: Bioinformatics, Stand-alone, Tools, Scripts, Use
2902 days ago
UPhO: Scripts for homology and orthology assessment from genomic sequences.
UPhO finds orthologs with and without inparalogs from input gene family trees. Refer to the Documentation.pdf for more detailed explanations on its usage, installation and dependencies. Type UPhO.py -h for help. The only input requierement for UPhO is a tree (or trees) in Newick format in which ...Tags: UPhO, Scripts, homology, orthology, assessment, genomic, sequences
1934 days ago
Scripts for the analysis of HGT in genome sequence data.
Scripts for the analysis of HGT in genome sequence dataTags: scripts, analysis, HGT, genome, sequence, data
2345 days ago
collinearity: scripts to parse and analyse MCScanX collinearity output
scripts to parse and analyse MCScanX collinearity outputTags: collinearity, scripts, parse, analyse, MCScanX, collinearity, output
2345 days ago
- VCFtools contains a Perl API (Vcf.pm) and a number of Perl scripts that can be used to perform common tasks with VCF files such as file validation, file merging, intersecting, complements, etc. The Perl tools support all versions of the VCF specification (3.2, 3.3, 4.0, 4.1 and 4.2), nevertheless...
Tags: VCFtools, Perl, API, Vcf.pm, Perl, scripts, VCF, validation, file, merging, intersecting, complements
2094 days ago
- There is a directory for each chapter of the book. Each directory contains a test.py program you can use with pytest to check that you have written the program correctly. I have included a short README to describe each exercise. If you have problems writing code (or if you wou...
Tags: python, minicodes, learn, codes, scripts
472 days ago
