Results for "Solution"
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...echniques and modeling, and data integration. Each student will apply their skills to a practical project, where they will design and implement a solution to a real-world problem under...1095 days ago
- ...es a tool to fix misassemblies by using paired-end reads to achieve an accuracy comparable to other assemblers, this is not a favorable solution.Fermi is designed to be used...
2786 days ago
- BBMAP • a solution for everything That content has been reformatted and it is being expanded to include more information. There are common options for most BBMap su...
2755 days ago
- ...encompasses both state-of-the-art tools for each step as well as new complementary tools tailored for ancient DNA data within a single integrated solution in an easily accessible forma...
2694 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
...th user-defined criteria (E-Value, identity, coverage, alignment length, etc.), Does not require any additional hardware, since it is a software solution. It is easy to install, cost-...2338 days ago
AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
...material showed up to ∼98% reduction of false variants when combined to conventional public pipelines and ∼48% to the in-house commercial solution, with a minimal loss of sensi...2318 days ago
MITObim - mitochondrial baiting and iterative mapping
...ime down the line. I provide further examples here as Jupyter notebooks. Get in touch if you feel like sharing your particular MITObim solution and I'd be happy to put it up...2180 days ago
Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced s...2016 days ago
- MEGAHIT is a single node assembler for large and complex metagenomics NGS reads, such as soil. It makes use of succinct de Bruijn graph (SdBG) to achieve low m...
1990 days ago
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
...espect to their AA translation while allowing NT sequences to contain multiple frameshifts and/or stop codons. MACSE is hence the first automatic solution to align protein-coding gene...1894 days ago
