Results for "Variation"

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  • Resolving the complexity of the human genome using single-molecule sequencing

    ...t more than 160 euchromatic gaps remain and aspects of its structural variation remain poorly understood ten...rence suggest a greater complexity of the human genome in the form of variation of longer and more complex re...

    922 days ago

  • Genome STRiP

    ...ls for discovering and genotyping structural variations using sequencing data. The methods are designed to detect shared variation using data from multiple indi...d support heterogeneous data sets, including variations in sequencing depth, read le...

    500 days ago

  • Stampy

    ...orkflows, including those for genomic resequencing, RNA-Seq and Chip-seq. Stampy excels in the mapping of reads containing that contain sequence variation relative to the reference, in...

    608 days ago

  • HistoneDB 2.0 – with variants

    ...the diversity of histone proteins and their sequence variants in many organisms. The resource was established to better understand how sequence variation may affect functional and str...

    595 days ago

  • Ribbon: Visualizing complex genome alignments and structural variation:

    Ribbon can be used for long reads, short reads, paired-end reads, and assembly/genome alignments. Instructions for each data format are available by clicking on "instruc...

    51 days ago

  • Pilon

    Pilon is a software tool which can be used to: Automatically improve draft assemblies Find variation among strains, including large event detection Pilon requires as input a FAS...

    711 days ago

  • R-chie

    ...ison and overlap of two structures, rank and display basepairs in colour and to also visualize corresponding multiple sequence alignments and co-variation information.R4RNA is the...

    505 days ago

  • Entrez Direct: E-utilities on the UNIX Command Line

    ...ntrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a UNI...

    457 days ago

  • mrFAST: Micro Read Fast Alignment Search Tool

    mrFAST is a read mapper that is designed to map short reads to reference genome with a special emphasis on the discovery of structural variation and segmental duplications. mrFAST maps...

    633 days ago

  • Google Genomics

    Explore genetic variation interactively. Compare entire cohorts in seconds with SQL-like queries. Compute transition/transversion ratios, genome-wide association, allelic freq...

    1128 days ago