Results for "XML"
Bio-Scripts
(JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1208 days ago
- ...libexpat1-dev libssl-dev libmysqlclient-dev libxml2-dev # RHEL/CentOS system ad...all -y expat-devel openssl-devel mysql-devel libxml2-devel # Create a folder w...ERL_BASE/perl-5.24.1 App::cpanminus JSON::Parse XML::Parser XML::Simple LWP LWP::...
2135 days ago
- ...sr/bin/env perl use strict; use warnings; use LWP::Simple; use XML::XPath; use XML::XPath::XMLParser; # Use D...segment=chr"; $URL_gene .= $chr . ":" . $start . "," . $end; my $xml = get($URL_gene); my $xp =...
2901 days ago
Installing pb-assembly on Linux !
...libxml2/2.9.0-goolf-1.4.10 binutils...0 libxml2/2.9.3-foss-2016a BioPerl/1....4.0 XML-LibXML/2.0018-goolf-1.4.10-Pe...2025 days ago
Pack a perl program with their dependencies on Ubuntu !
#Follow steps to create your own executable ./web jit@jit-HP-Pro-3335-MT:~/Downloads/autoConTAMPR/bin$ sudo apt install libpar-packer-perl Reading package lists.....1502 days ago
- (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 -...
1433 days ago
- (JitMetaENV) ➜ day2 conda install -c bioconda kraken2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen sol...
1206 days ago
- (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen...
1206 days ago
Install grabseqs using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1045 days ago
- ...flat query-anchored, no identities, 5 = query-anchored no identities and blunt ends, 6 = flat query-anchored, no identities and blunt ends, 7 = XML Blast output, 8 = Tabular ou...
941 days ago
