Results for "benchmarking and designing tools"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you nee...it. That will be very painful and annoying task. I recommend th...ssing parameters...CPAN build and cache...e as follows: bioperl - Perl tools for computational molecular b...rl wrappers: moduleslibbio-samtools-perl - Perl interface to SamT...3941 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biologi...o learn non-technical skills, and have an open mind to sources..., but I have other priorities and can’t make work my life.&...ited about your research, the tools and technology you are using,...3941 days ago
Five points for bioinformatics software/tools
...open We generally think free and cheap are useless. But this c...e best part about open source tools/sof...ics of programming languages, and if you are not good at it, then...is not available to everyone and your data can’t be valida...rely wrong. Using proprietary tools does not absolve you of the n...3698 days ago
Computational Proteomics : Lets remember the basics
I spend some of my valuable time in computational drug designing sector. I remember my i...ucational material, software, tools, databses, viewer, file format and many more stuff at one place&nb...or software.3. Dig it better and deeper guys .. design it....3478 days ago
List of bioinformatics workflow management tools !
Here are list of Workflow Managers BigDataScript &...ribing analysis workflows and tools that are portable and scala...across a variety of software and hardw...w management to visualization tools. [ paper-2018 |&nbs...t simplifies writing parallel and scalable pipelines in a portabl...1133 days ago
Tools to detect synteny blocks regions among multiple genomes
...ved by genome rearrangements, and so synteny blocks from two related species (e.g., humans and mice) will be roughly similar...hey are pouring lots of money and energy to read the entire gen...inding indicates conservation and rearrangements of certain evo...org/) SyMAP (Synteny Mapping and Analy...2601 days ago
List of bioinformatics packages for NGS analysis !
Package suites gather software packages and installation tools for specific languages or p...nbsp;– Freely available tools for biological computing in P...included cookbook, packaging and thorough documentation. Part of...a – Bioinformatics and computational biology infastruc...1133 days ago
List of gene ontology software and tools
...hips between biological terms and and all genes that are instances...e genes. It provides several tools to view/access the GO term hi...nscription factors, signaling and metabolic pathways, disease and...sTo GOssTo and GOssToWeb are tools to calculate the semantic sim...3701 days ago
List of useful machine / ai learning resources !
ML cheatsheet ! https://github.com/remicnrd/ml_cheatsheet Visual AI / ML https://setosa.io/ev/ Simple and efficient tools for predictive data analysis https://scikit-learn.org/stable/1123 days ago
Calling narrow and broad peaks from ChIP-Seq data
Know about the state-of-the-art algorithms implemented in Strand NGS for detecting the binding sites o...f transcription factor (narrow peaks) and enriched regions of histone m...ad peaks) from ChIP-Seq data.Read the benchmarking study on Calling narrow and b...3188 days ago
