Results for "files"
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Latest paper on comparison of mapping tools
...earch-pub.gene.com/gmap/ RMAP http://rulai.cshl.edu/rmap/ mrsFAST http://mrsfast.sourceforge.net/Home http://sourceforge.net/projects/mrsfast/files/mrsfast-ultra-3.1.0/ BFAST...3888 days ago
Public Databases for Bioinformatics !
...B of SSD storage 12TB RAID5 local storage Filesystem: /users/$USER defaul...lel programming patterns: # gzip a bunch of files parallel gzip -- *.FILESTOGZ...AP datasets https://www.encodeproject.org/files/ENCFF446WOD/@@download/ENCFF4...1130 days ago
Integrative Genomics Viewer (IGV) tutorial
The Integrative Genomics Viewer (IGV) from the Broad Center allows you to view several types of data files involved in any NGS analysis that employs a reference genome, including how...3576 days ago
- Collection of Python libraries to parse bioinformatics files, or perform computation related to assembly, annotation, and comparative genomics.
1084 days ago
- ...es Find variation among strains, including large event detection Pilon requires as input a FASTA file of the genome along with one or more BAM files of reads aligned to the input...
3000 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different assemblies (such as Human hg18 (NCBI36) <> hg19 (GRCh37), Mouse mm...
3000 days ago
- ...ToolBox libraries provide a unified, abstracted interface to multiple common gene annotation formats and the collection of data from multiple data files. They rely on BioPerl SeqFeat...
2989 days ago
- ...g Locally ConsistentEncoding) is a tool for compressing FASTQ files. It is designed specifically for the Illumina-generated FASTQ files, but supports any valid FASTQ...
2933 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...etting up your computing environment Retrieving and storing sequencing files (your own data or from p...on Mapping reads to a reference genome Manipulating SAM/BAM alignment files Visualizing data in a genome...2922 days ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.
2896 days ago
