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• • BioStar@biostar

  

  BioStar answered the question Unable to restart Apache ! 477 days ago

  To restart the Apache HTTP server, you can use the command-line interface. The exact command may vary depending on your operating system. Here are commands for some common operating systems: On Linux (e.g., Ubuntu, CentOS): You can use the...
• • BioStar@biostar

  

  BioStar published a blog post Understanding and Confronting AMR: The Looming Threat of Antimicrobial Resistance 477 days ago

  Antimicrobial resistance (AMR) is a complex and pressing challenge in the field of microbiology and public health.
• • Abhi@abhinav

  

  Abhi created a page Mitochondrial genome assembly tools ! 477 days ago

  Mitochondrial genome assembly tools are specialized software and algorithms designed to accurately reconstruct the mitochondrial genome (mitogenome) from sequencing data, typically obtained through techniques like next-generation sequencing (NGS)....
• • Abhi@abhinav

  

  Abhi bookmarked PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data 477 days ago

  Phylogenomic Analysis Pipeline for Herbarium Specimens What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant materials. The outcomes include the plastid genome (plastome) assemblies,...

  https://github.com/lmcai/PhyloHerb/
• • Abhi@abhinav

  

  Abhi bookmarked MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads 477 days ago

  MitoHiFi v3.2 is a python pipeline distributed under MIT License ! MitoHiFi was first developed to assemble the mitogenomes for a wide range of species in the Darwin Tree of Life Project...

  https://github.com/marcelauliano/MitoHiFi
• • Neel@neelam

  

  Neel created a page Steps to find all the repeats in the genome ! 482 days ago

  To find repeats in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker tool with the "--length" option[0]. Here's a step-by-step guide: Install RepeatMasker: First, you need to install RepeatMasker on your system. You...
• • Neel@neelam

  

  Neel published a news post NCBIBLAST+ 2.14.1 now available 483 days ago

  NCBIBLAST+ 2.14.1 now available with improved documentation, faster and more reliable database downloads, and some bug fixes.
• • Neel@neelam

  

  Neel bookmarked MitoFinder 484 days ago

  Allio, R., Schomaker-Bastos, A., Romiguier, J., Prosdocimi, F., Nabholz, B., & Delsuc, F. (2020) Mol Ecol Resour. 20, 892-905. (publication link) Mitofinder is a pipeline to assemble mitochondrial genomes...

  https://github.com/RemiAllio/MitoFinder
• • Neel@neelam

  

  Neel posted a new ad in the Opportunity Program Officer, Bioinformatics at Jhpiego 485 days ago
• • Neel@neelam

  

  Neel published a news post GenBank release 257.0 is now available! 491 days ago

  GenBank release 257.0 is now available! This release has 25.10 trillion bases and 3.69 billion records.
• • Abhi@abhinav

  

  Abhi bookmarked Biostats book ! 499 days ago

  https://practical-stats-med-r.netlify.app/

  https://practical-stats-med-r.netlify.app/
• • Abhi@abhinav

  

  Abhi answered the question Unable to restart Apache ! 516 days ago

  More likely you have error in config file.  Go to /etc/apache2 and run the test $ apache2ctl configtest I will report the error line in your config file. 
• • LEGE@lege

  

  LEGE asked Unable to restart Apache ! 516 days ago

  abc@ubuntu:/var/www/html$ sudo systemctl restart apache2Job for apache2.service failed because the control process exited with error code.See "systemctl status apache2.service" and "journalctl -xe" for details.
• • BioStar@biostar

  

  BioStar created a page Bioinformatics tools for genome assembly ! 520 days ago

  There are numerous genome assembly tools available, each with its strengths and weaknesses. Here is a list of some widely used genome assembly tools as of my last update in September 2021: SPAdes: An assembler specifically designed for...
• • BioStar@biostar

  

  BioStar answered the question What I should focus on before applying to PhD bioinformatics positions ? 520 days ago

  Before applying to Ph.D. positions in bioinformatics, it's essential to prepare yourself thoroughly to increase your chances of success. Here are some key areas to focus on: 1. Academic Preparation: Ensure you have a strong foundation in...
• • BioStar@biostar

  

  BioStar answered the question How to create a Linux OS bootable drive ? 520 days ago

  Creating a bootable Linux OS drive involves creating a bootable installation media (such as a USB flash drive) from the Linux distribution's ISO file. The process can vary slightly depending on your operating system (Windows, macOS, or Linux). Here...
• • BioStar@biostar

  

  BioStar answered the question Should I buy chromebook for bioinformatics work ? 520 days ago

  Whether you should buy a Chromebook for bioinformatics work depends on several factors, including the specific bioinformatics tasks you need to perform, your workflow, and your overall computing needs. Chromebooks can be a cost-effective option for...
• • BioStar@biostar

  

  BioStar answered the question What are the best method to validate genome assembly ? 520 days ago

  Validating a genome assembly is crucial to ensure its accuracy and completeness. Several methods can be employed to assess the quality of a genome assembly. Here are some of the best methods commonly used in the field: Benchmarking against a...
• • BioStar@biostar

  

  BioStar published a news post NCBI Datasets pages 532 days ago

  Assembly and Genome record pages now redirect to new NCBI Datasets pages.
• • Abhi@abhinav

  

  Abhi created a new bio-script R script for Circos plot ! 534 days ago

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