BOL: All Site Activity

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- Jitendra Narayan@admin
Jitendra Narayan answered the question Is there any quick way to check the installed Perl modules from Linux/Unix command line. 4724 days ago

You can try this: perl -MFile::Find=find -MFile::Spec::Functions -Tlw -e 'find { wanted => sub { print canonpath $_ if /\.pm\z/ }, no_chdir => 1 }, @INC' In above Perl Oneliner File::Find and File::Spec::Functions module are used to list...
- Jitendra Prajapati@jprajapati81
Jitendra Prajapati answered the question Is there any quick way to check the installed Perl modules from Linux/Unix command line. 4724 days ago

Hey !! There is a Perl module ExtUtils::Installed for this kind of job. You should install it from cpan.my $Inst = ExtUtils::Installed->new();my @Modules = $Inst->modules();print "Current List of Installed PERL Modules:\n\n";foreach my...
- Neel@neelam
Neel asked Is there any quick way to check the installed Perl modules from Linux/Unix command line. 4724 days ago

We always need to keep track of all the Perl modules, and install new one if required. Generally, whenever we run the Perl script it flash error message with the name of module not installed. I would like to know the quicker way to check the...
- Jitendra Narayan@admin
Jitendra Narayan created a page Bioinformatics Definitions 4724 days ago

"Bioinformatics is a science of biological predictions and analysis" -- Jitendra Narayan "The mathematical, statistical and computing methods that aim to solve biological problems using DNA and amino acid sequences and related...
Comments
- Shruti Paniwala@shruti
  
  Shruti Paniwala 4532 days ago
  The definition of bioinformatics with new twist ... they exlain with venn diagram. http://blog.fejes.ca/?p=2418
- Jit@jit.aber
  
  Jit 4314 days ago
  A review on bioinformatics http://www.ebi.ac.uk/luscombe/docs/imia_review.pdf explain it with an ease.
- Jit@jit.aber
  
  Jit 3628 days ago
  Computing Biology et al @ http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005050
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- Jitendra Narayan@admin
Jitendra Narayan created a page BioRuby :Ruby packages for biologist 4724 days ago

BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides an integrated environment in bioinformatics for the Ruby...
- Jitendra Narayan@admin
Jitendra Narayan created a page Ruby Language 4724 days ago

Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced functional programming with imperative programming Ruby is a dynamic, reflective, general purpose object-oriented programming language that combines syntax...
- priyojit mangan@sanahal
priyojit mangan is now a friend with Jitendra Narayan 4724 days ago
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Jitendra Narayan@admin
- Jitendra Narayan@admin
Jitendra Narayan is now a friend with priyojit mangan 4724 days ago
Jitendra Narayan@admin
priyojit mangan@sanahal
- Archana Malhotra@archana
Archana Malhotra is now a friend with priyojit mangan 4724 days ago
Archana Malhotra@archana
priyojit mangan@sanahal
- priyojit mangan@sanahal
priyojit mangan is now a friend with Archana Malhotra 4724 days ago
priyojit mangan@sanahal
Archana Malhotra@archana
- Neel@neelam
Neel commented on an answer to a question 4725 days ago

Knowing a little of everything is often better than having one expert skill. Learn as much as you can. Learn new bioinformatics tools, techniques, complex biological rules, programming logics .. etc.
- Jit@jit.aber
Jai Singh chose the best answer to the question What a bioinformatician should must know ? 4725 days ago

There's a wide range of topics that are useful if you're interested in pursuing bioinformatics, and it's not possible to learn them all. However, in our conversations with scientists working at companies, we've picked up on the following "core...
- Neel@neelam
Neel answered the question What a bioinformatician should must know ? 4725 days ago

Knowing a little of everything is often better than having one expert skill. Learn as much as you can. Learn new bioinformatics tools, techniques, complex biological rules, programming logics .. etc.
- Jitendra Narayan@admin
Jitendra Narayan posted to the wire 4725 days ago

Added new page options in BOL. Aim is to provide good quality collective information/tutorial. #BOLpage
- Jitendra Narayan@admin
Jitendra Narayan created a page Bio++ : C Language libraries for your biological need 4725 days ago

C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it comes with a genuinely useful standard library that can itself be implemented in C, and it is both efficient and portable. C has always...
Comments
- Surajeet@surajeet
  
  Surajeet 4604 days ago
  Bio++ Tutorial & Cookbook by Julien Dutheil & Sylvain Gaillard http://biopp.univ-montp2.fr/Documents/Tutorial/Tutorial.pdf
  http://www.biotnet.org/sites/biotnet.org/files/documents/25/biopython_intro.pdf
- Rahul Nayak@rahul
  
  Rahul Nayak 4603 days ago
  The Bio++ Program Suite is a package of programs using the Bio++ libraries and dedicated to Phylogenetics and Molecular Evolution.
  
  Bio++ Suite contains the following components:
  
  bppPars (Optimize a phylogenetic tree according to maximum parsimony).
  bppDist (Estimate a distance matrix and build a phylogenetic tree according to several model of evolution and reconstruction methods).
  bppML (Optimize a phylogenetic tree and other model parameters according to maximum likelihood. Several models are supported).
  bppSeqGen (Simulate data sets according to a phylogenetic tree and an evolutionary model).
  bppAncestor (Reconstruct ancestral sequences).
  bppConsense (Build consensus trees and compute bootstrap values).
  bppSeqMan (Sequence manipulation and file format conversion).
  bppPhySamp (Sample sequences from a file according to a phylogenetic tree).
  bppReRoot (Reroot all trees in a file according to a user-specified list of outgroups).
  
  All programs share a common option file format.
  
  More at http://gna.org/projects/bppsuite
  
  http://home.gna.org/bppsuite/
  
  http://biopp.univ-montp2.fr/manual/pdf/bppsuite.pdf
- Jitendra Narayan@admin
  
  Jitendra Narayan 4017 days ago
  MafFilter is a program to process genome alignment in the Multiple Alignment Format. Current version is 1.1.2 http://biopp.univ-montp2.fr/forge/maffilter
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- Jitendra Narayan@admin
Jitendra Narayan created a page BioProgramming 4725 days ago

The completion of the first human genome drafts was just a start of the modern DNA sequencing era which resulted in further invention, improved development toward new advanced strategies of high-throughput DNA sequencing, so called the...
Comments
- Rahul Nayak@rahul
  
  Rahul Nayak 4611 days ago
  A Quick Guide for Developing Effective Bioinformatics Programming Skills http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1000589
- Manisha Mishra@manisha
  
  Manisha Mishra 4531 days ago
  Comparative study of biological programming language http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2267699/
- Jit@jit.aber
  
  Jit 3776 days ago
  tacg – a grep for DNA http://www.ncbi.nlm.nih.gov/pmc/articles/PMC99049/
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- Jitendra Narayan@admin
Jitendra Narayan posted a new ad in the ResearchLabs Jayaram Lab 4725 days ago
- Jitendra Narayan@admin
Jitendra Narayan posted a new ad in the Opportunity Postdoctoral position in bioinformatics @ Sweden 4725 days ago
- Jitendra Narayan@admin
Jitendra Narayan posted a new ad in the Opportunity Bioinformatics PhD studentship available in New Zealand 4725 days ago
- Jitendra Narayan@admin
Jitendra Narayan posted to the wire 4726 days ago

Updated two new features in BOL, Opportunity and ResearchLabs menu. # Opportunity #ResearchLabs #NewFeature

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