BioStar
Bioinformatician
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- BioStar on Sibelia: A comparative genomics tool (1954 days ago): Basic usage =========== In this manual it is assumed that "Sibelia" is...
- BioStar on AutoDock Vina: an open-source program for doing molecular docking. (2091 days ago): AutoDockFR (or ADFR in short) is a protein-ligand docking...
- BioStar on AutoDock Vina: an open-source program for doing molecular docking. (2091 days ago): QVina-W, a new docking tool particularly useful for wide search space,...
- BioStar on Nextflow: Data-driven computational pipelines (2206 days ago): A Review of Scalable Bioinformatics Pipelines by Bjørn Fjukstad &...
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reads, genome, assembly, data, tool, sequence, sequencing, genomic, analysis, package, pipeline, Correction, Gene, Illumina, Breeding, Bioinformatics, Automated, learn, web, alignment, sequences, accurate, program, R, DNA, long, server, tools, Annotation, metagenomics, genomes, Visualization, graph, error, ngs, PacBio, Ontology, RNA, biological, generation, open-source, software, Genomics, Hi-C, RNA-seq, tree, python, Training, identification, genes
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BioStar's bookmarks
gget
By BioStar 1070 days agogithub.com - gget is a free, open-source command-line tool and Python package that enables efficient querying of genomic databases. gget consists of a collection of separate but interoperable modules, each designed to facilitate one type of...Upset plots !
By BioStar 1077 days agojokergoo.github.io - Upset plots are a type of visualization used to analyze the intersection of sets or categories. They are particularly useful for displaying data with multiple categories and analyzing their overlaps. In an upset plot, each row represents a category...Bioinformatics Training Material !
By BioStar 1083 days agoglittr.org - Glittr is a curated list of bioinformatics training material.All material is: In a GitHub or GitLab repository Free to use Written in markdown or similar NOTE: This list of courses is selected only based on the above criteria.There...Bioinformatics Chat !
By BioStar 1088 days agobioinformatics.chat - The bioinformatics chat is a podcast about computational biology, bioinformatics, and next generation sequencing. The bioinformatics chat is produced by Roman Cheplyaka and hosted by Roman and Jacob Schreiber.Orange: Data mining
By BioStar 1088 days agoorangedatamining.com - Open source machine learning and data visualization. Build data analysis workflows visually, with a large, diverse toolbox.ALE: Assembly Likelihood Estimator
By BioStar 1094 days agogithub.com - Just import the assembly, bam and ALE scores. You can convert the .ale file to a set of .wig files with ale2wiggle.py and IGV can read those directly. Depending on your genome size you may want to convert the .wig files to the BigWig format.Circos visualization !
By BioStar 1096 days agowlcb.oit.uci.edu - Circos visualization https://wlcb.oit.uci.edu/modules/index.htmlHeatmap Draw !
By BioStar 1096 days agosoftware.broadinstitute.org - Server for heatmap generation ! https://software.broadinstitute.org/morpheus/Bioinformatics Training Collections !
By BioStar 1096 days agogithub.com - Useful list of bioinformatics training collections @ https://github.com/sib-swiss/training-collection
