biit.cs.ut.ee - g:Convert enables to convert between various gene, protein, microarray probe and numerous other types of namespaces. We provide at least 40 types of IDs for more than 60 species. The 98 different namespaces supported for human include Ensembl,...
https://proksee.ca/ - Proksee is an expert system for genome assembly, annotation and visualization. To begin using Proksee, provide a complete genome sequence, sequencing reads or a CGView/Proksee map JSON file.
search.carrot2.org -
This is the demo application of the Carrot2 clustering engine. It uses Carrot2's algorithms to organize search results into thematic folders.
User interfaces
Web Search Clustering organizes search results from public...
researchrabbitapp.com - You’re determined students, passionate teachers, and inspired creators of everything we know! Yet, all the researchers we spoke with over the past year uncovered the same reality:
Despite the degrees you’ve earned, the effort and...
carpentries-incubator.github.io - Introduction to Bioinformatics workflows with Nextflow and nf-core
Getting Started with Nextflow
Objectives Understand
What a workflow management system is.
Understand the benefits of using a workflow management system.
Explain the benefits of...
github.com - The pipeline was developed based on a popular workflow framework Nextflow, composed of four core procedures including reads alignment, assembly, identification and quantification. It contains various unique features such as well-designed...
daehwankimlab.github.io - Resource for downloading all the HISAT2 related files
Please cite:
Kim, D., Paggi, J.M., Park, C. et al. Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype. Nat Biotechnol 37, 907–915...
www.encodeproject.org - The ENCODE project uses Reference Genomes from NCBI or UCSC to provide a consistent framework for mapping high-throughput sequencing data. In general, ENCODE data are mapped consistently to 2 human (GRCH38, hg19) and 2 mouse...
www.nature.com - We aim to provide readers with a gentle introduction to a few key machine learning techniques, including the most recently developed and widely used techniques involving deep neural networks. We describe how different techniques may be suited to...
github.com - Ventoy is an open source tool to create bootable USB drive for ISO/WIM/IMG/VHD(x)/EFI files. With ventoy, you don't need to format the disk over and over, you just need to copy the image files to the USB drive and boot it. You can copy many image...