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  • TULIP - The Uncorrected Long read Integration Pipeline

TULIP - The Uncorrected Long read Integration Pipeline

https://github.com/Generade-nl/TULIP

TULIP currently consists of two Perl scripts, tulipseed.perl and tulipbulb.perl. These are very much intended as prototypes, and additional components and/or implementations are likely to follow.

Tulipseed takes as input alignments files of long reads to sparse short seeds, and outputs a graph and scaffold structures.