CrossMap is a program for genome coordinates conversion between different assemblies (such as hg18 (NCBI36) <=> hg19 (GRCh37)). It supports commonly used file formats including BAM, CRAM, SAM, Wiggle, BigWig, BED, GFF, GTF, MAF VCF, and gVCF.
https://www.researchgate.net/publication/357925950_FastRemap_A_Tool_for_Quickly_Remapping_Reads_between_Genome_Assemblies
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https://www.researchgate.net/publication/357925950_FastRemap_A_Tool_for_Quickly_Remapping_Reads_between_Genome_Assemblies