Rahul Nayak
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By Jit 2545 days agogithub.com - Flye is a de novo assembler for long and noisy reads, such as those produced by PacBio and Oxford Nanopore Technologies. The algorithm uses an A-Bruijn graph to find the overlaps between reads and does not require them to be error-corrected. After...Bioinformatics Centre, Bose Institute vacancy of Research Associate / Senior Research Fellow
Bioinformatics Centre, Bose Institute vacancy of Research Associate / Senior Research Fellow Location where with post of Research Associate / Senior Research Fellow is available: Bioinformatics Centre, Bose Institute in Kolkata, West...npScarf: real-time scaffolder using SPAdes contigs and Nanopore sequencing reads
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Bioinformatics Trainee Eligibility : MSc Location : Kolkata Last Date : 28 Dec 2015 Hiring Process : Walk - In University of Kalyani Bioinformatics Trainee Job position in University of Kalyani Number of Posts : 02 Qualification : M.Sc....NanoPack: visualizing and processing long-read sequencing data
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Focusing on understanding the molecular mechanisms that regulate mRNA translation, localization and stability and role of non-coding RNAs in this process. Up to 90% of human DNA is estimated to be transcribed into so called non-coding RNAs that are...d2Tools: The toolbox for counting the frequency of k-tuple from sequencing datasets and calculate...
By Jit 2406 days agocode.google.com - d2Tools are the toolbox for counting the frequency of K-tuple from sequencing datasets and then calculating the pairwise dissimilarity matrix between samples with the d2-style(d2/d2*/d2S representing d2/d2Star/d2shepp, respectively)...RA at University of Pune
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By Jit 2294 days agoMGI, a subsidiary of global genomics leader BGI Group, announced pricing and its first early access customer for the new ultra high-throughput sequencer, MGISEQ-T7, saying it has driven down sequencing cost to $5 per gigabytemosdepth: fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
By Jit 1987 days agogithub.com - mosdepth can output: per-base depth about 2x as fast samtools depth--about 25 minutes of CPU time for a 30X genome.mean per-window depth given a window size--as would be used for CNV calling.the mean per-region given a BED file of regions.a...
