Rahul Nayak
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Structure of Binary files used for storing sequencing data-bam and sff
Last updated 4804 days ago by Rahul AgarwalMany times bioinformatician needs to parse binary files like bam and sff. Advantage of binary files is that they occupy less space in memory with maximum information content. Link for those who looking for structure of Bam and sff...Research Scientist at IIT Madras
Research Scientist/Project Associate/Project Assistant Jobs opportunity in Indian Institute of Technology Madras (IIT Madras) Research Scientist Qualification : Ph.D in any branch of life science or bioinformatics or computational biology...The First 50 Plant Genomes
By Rahul Agarwal 4733 days agowww.crops.org - Plant scientists can exploit available 50 plant complete genomic data for their resequencing or other related projects for understanding the genetic mechanism behind their different traits and molecular evolution. Complete information about these...GeneProf: analysis of high-throughput sequencing experiment
By Jit 3380 days agowww.geneprof.org - GeneProf is a web-based, graphical software suite that allows users to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generation Sequencing" or NGS): Next-gen analysis for next-gen data! Some of...RA at Central University of Rajasthan
Research Fellow Bioinformatics Eligibility : MSc(Bio-Chemistry, Bio-Informatics, Bio-Tech) Location : Ajmer Last Date : 13 Feb 2016 Hiring Process : Face to Face Interview Central University of Rajasthan Research Fellow Job vacancies...AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
By BioStar 3211 days agosourceforge.net - AIRVF that works on flowgram, raw and mapped reads and called variants to reduce artifact-driven false variant calls. Tests on sequencing data of standard reference material showed up to ∼98% reduction of false variants when combined to...NCBI Remap
By Jit 3890 days agowww.ncbi.nlm.nih.gov - NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses different methods to achieve these mappings. It is also available through a simple web interface or you can use...ALPACA: A hybrid strategy for assembly of genomic DNA shotgun sequencing reads.
By Seema Singh 3082 days agogithub.com - ALPACA requires Celera Assembler 8.3 or later. It is recommended to build Celera Assembler from source. (Why? The pre-built binaries CA_8.3rc1 and CA8.3rc2 will work for any large data set. Detail paper...Przeworski lab
Genetic differences among individuals reflect the combined effects of mutation, recombination, population history and natural selection. As a result, studies of natural variation can provide important insights into evolutionary and genetic...
