Rahul Agarwal
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Roderic Guigó Lab
Research in our group focuses on the investigation of the signals involved in gene specification in genomic sequences (promoter elements, splice sites, translation initiation sites, etc…). We are interested both in the mechanism of their recognition...EXCAVATOR: detecting copy number variants from whole-exome sequencing data
By Radha Agarkar 2183 days agosourceforge.net - EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR combines a three-step normalization procedure with a novel heterogeneous hidden Markov model algorithm and a calling method that classifies...Bioinformatics JRF/SRF position at IARI
DIVISION OF NEMATOLOGY INDIAN AGRICULTURAL RESEARCH INSTITUTE NEW DELHI 110012 Applications are invited for the posts of one Junior Research Fellow and one RA in the DBT funded project entitled “ Plant parasitic nematode genome informatics -...Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By Rahul Nayak 2000 days agogithub.com - Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...ngs-bits - Short-read sequencing tools
By Neel 1805 days agogithub.com - Binaries of ngs-bits are available via Bioconda. Alternatively, ngs-bits can be built from sources: Binaries for Linux/macOS From sources for Linux/macOS From sources for WindowsURDIP Pune Bioinformatics SRF/PA Openings
CSIR UNIT FOR RESEARCH AND DEVELOPMENT OF INFORMATION PRODUCTS NCL Campus, S.No.113,114, Pashan, Pune 411 008 ADVERTISEMENT NO. - URDIP/ 5/2014 Learning opportunity for young Science and Engineering professionals to make a career in...HASLR: a tool for rapid genome assembly of long sequencing reads
By LEGE 1791 days agogithub.com - HASLR is a tool for rapid genome assembly of long sequencing reads. HASLR is a hybrid tool which means it requires long reads generated by Third Generation Sequencing technologies (such as PacBio or Oxford Nanopore) together with Next Generation...Bioinformatics SVIMS Project Assistant Walk IN
SRI VENKATESWARA INSTITUTE OF MEDICAL SCIENCES TIRUPATI, ANDHRA PRADESH, INDIA- 517 507 BIOINFORMATICS CENTRE, DEPARTMENT OF BIOINFORMATICS Eligible candidates are invited for a walk-in-interview for recruitment of Project Assistant in SVIMS...Parliament2: Runs a combination of tools to generate structural variant calls on whole-genome...
By Jit 1673 days agogithub.com - Parliament2 identifies structural variants in a given sample relative to a reference genome. These structural variants cover large deletion events that are called as Deletions of a region, Insertions of a sequence into a region, Duplications of a...
