Jitendra Narayan
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Frequent words problem solution by Perl
Last updated 3923 days ago by JitSolved with perl http://rosalind.info/problems/1a/ #Find the most frequent k-mers in a string.#Given: A DNA string Text and an integer k.#Return: All most frequent k-mers in Text (in any order).use strict;use warnings;my...-
Clump Finding Problem Solved with Perl
Last updated 3005 days ago by JitThe question at http://rosalind.info/problems/1d/ Script are moved to http://bioinformaticsonline.com/snippets/view/34633/clump-finding-problem-solved-with-perl -
Software packages for next gen sequence analysis
Last updated 3913 days ago by Rahul Nayak Comments (5)Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection,... Bioinformatics Made Easy Search: Bioinformatics tools and run genomic analysis in the cloud
By Rahul Nayak 3852 days agohttps://insidedna.me/ - InsideDNA makes hundreds of bioinformatics tools immediately available to run via an easy-to-use web interface and allows an accurate search across all functions, tools and pipelines. With InsideDNA, you can upload and store your own...Cancer research database
By Neel 3839 days agoResearchers in Andhra Pradesh have developed a database to identify genes that are common in tumours to provide their colleagues with easy access to insights into the genetic alterations in cancer.MAKER
By Jitendra Narayan 3681 days ago Comments (1)www.yandell-lab.org - MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. MAKER identifies repeats,...liftover
By Jitendra Narayan 3680 days ago Comments (1)github.com - Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at...Cancer's origins revealed
By Jitendra Narayan 4587 days agoResearchers discover the genetic imprints and signatures left by DNA-damaging processes that lead to cancer.
