Rahul Agarwal
I'm a Bioinformatician and Programmer
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Understanding DUMP files from NCBI Taxonomy database !
By Shruti Paniwala 864 days agoTaxonomy database !Ancestral Genomes: a resource for reconstructed ancestral genes and genomes across the tree of life
By Abhimanyu Singh 2215 days agoancestralgenomes.org - Ancestral Genomes (http://ancestralgenomes.org) is a resource for comprehensive reconstructions of these ‘fossil genomes’. Comprehensive sets of protein-coding genes have been reconstructed for 78 genomes of now-extinct species...ClueGO: a Cytoscape plug-in that visualizes the non-redundant biological terms for large clusters...
By BioStar 1565 days agowww.ici.upmc.fr - ClueGO is a Cytoscape plug-in that visualizes the non-redundant biological terms for large clusters of genes in a functionally grouped network and it can be used in combination with GOlorize. The identifiers can be uploaded from a text file or...Science for Life Laboratory (SciLifeLab)-Sweden
Science for Life Laboratory (SciLifeLab) is a national center for molecular biosciences with focus on health and environmental research. The center combines frontline technical expertise with advanced knowledge of translational medicine and...Orthoflow: workflow for phylogenetic inference of genome-scale datasets of protein-coding genes
By LEGE 278 days agogithub.com - Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes. Our goal was to make it straightforward to work from a combination of input sources including annotated contigs in Genbank format and FASTA files...Fourth Branch of Life
By Jitendra Narayan 4095 days agoNewly Found Pandoraviruses Hint at a Fourth Branch of Life
Master Thesis: Trans-membrane topology prediction through Markov based decoders
By Rahul Agarwal 4149 days agoAbstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable knowledge –based potentials that can be used for automatic prediction of...The Minerva Research Group for Bioinformatics
The focus of the bioinformatics group is to use computational approaches to gain an insight into genome evolution in primates. http://www.eva.mpg.de/genetics/bioinformatics/overview.html?Fsize=0%2C%20%40%2F%27 Kelso Group Department of...Automatic Predictive Model Constructor - APMC
By Jan Bińkowski 1897 days agoI would like to invite everyone interested in the subject of machine learning in life science, to test APMC module, it`s a fully automatic tool (created by students) to simply create and develop supervised machine learning models for...
Phylogenetic for Bioinformatics
Last updated 4150 days ago by Jitendra Narayan Comments (2)Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Evidence from morphological, biochemical, and gene sequence data suggests that all organisms on Earth are genetically related, and the genealogical...
