github.com - Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs. Manta discovers, assembles...
github.com - Filtering on quality and/or read length, and optional trimming after passing filters.Reads from stdin, writes to stdout.
Intended to be used:
directly after fastq extraction
prior to mapping
in a stream between extraction and...
DIVISION OF NEMATOLOGY
INDIAN AGRICULTURAL RESEARCH INSTITUTE
NEW DELHI 110012
Applications are invited for the posts of one Junior
Research Fellow and one RA in the DBT funded project entitled “ Plant parasitic nematode genome informatics -...
github.com - The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are...
qualimap.bioinfo.cipf.es - Qualimap 2 is a platform-independent application written in Java and R that provides both a Graphical User Inteface (GUI) and a command-line interface to facilitate the quality control of alignment sequencing data and its derivatives like...
CSIR UNIT FOR RESEARCH AND DEVELOPMENT OF INFORMATION PRODUCTS
NCL Campus, S.No.113,114, Pashan, Pune 411 008
ADVERTISEMENT NO. - URDIP/ 5/2014
Learning opportunity for young Science and Engineering professionals to make a career in...
samstat.sourceforge.net - SAMStat is an efficient C program to quickly display statistics of large sequence files from next generation sequencing projects. When applied to SAM/BAM files all statistics are reported for unmapped, poorly and accurately mapped reads...
SRI VENKATESWARA INSTITUTE OF MEDICAL SCIENCES
TIRUPATI, ANDHRA PRADESH, INDIA- 517 507
BIOINFORMATICS CENTRE, DEPARTMENT OF BIOINFORMATICS
Eligible candidates are invited for a walk-in-interview for recruitment of Project Assistant in SVIMS...