Jit
Enthusiast computational biologist with business dream !!!
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RA Bioinformatics at NATIONAL INSTITUTE OF BIOMEDICAL GENOMICS, INDIA
NATIONAL INSTITUTE OF BIOMEDICAL GENOMICS (An Autonomous Institution of the Government of India) P.O.: N.S.S., Kalyani 741251, West Bengal Advertisement No. 137/ESTB/NIBMG/17-18 Position available Project Description: Several positions are...MGcV: the microbial genomic context viewer for comparative genome analysis
By Jit 3147 days agohttp://mgcv.cmbi.ru.nl/ - MGcV is an interactive web-based visalization tool tailored to facilitate small scale genome analysis. To start using MGcV: Supply your genes/genomic segments/phylogenetic tree of interest in the input-box by selecting the type of identifier...Bioinformatics lectures !
By Jit 3208 days agorob-p.github.io - Computational Biology is a huge field of study, that touches upon many distinct algorithmic and biological areas of study. What we are able to cover in this course will depend, in part, on the pace at which we move, which I will attempt to...KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
By Jit 2989 days ago Comments (1)github.com - KAT is a suite of tools that analyse jellyfish hashes or sequence files (fasta or fastq) using kmer counts. The following tools are currently available in KAT: hist: Create an histogram of k-mer occurrences from a sequence file. Adds metadata in...India and Germany to begin joint research in the area of 'Bioinformatics in Health Research'
By Rahul Nayak 3159 days agoTo facilitate bilateral cooperation in biotechnology between the scientific communities of India and Germany, the Department of Biotechnology (DBT) will soon begin collaborative research in the identified priority area of 'Bioinformatics in Health...DeepVariant : an analysis pipeline that uses a deep neural network to call genetic variants from...
By Jit 2421 days agogithub.com - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation...An Introduction to Applied Bioinformatics
By Jit 3115 days agohttp://readiab.org/ - IAB is primarily being developed by Greg Caporaso(GitHub/Twitter: @gregcaporaso) in the Caporaso Lab at Northern Arizona University. You can find information on the courses I teach on my teaching website and...Juicebox: Visualization and analysis software for Hi-C data
By Jit 2394 days agogithub.com - Juicebox is visualization software for Hi-C data. This distribution includes the source code for Juicebox, Juicer Tools, and Assembly Tools. Download Juicebox here, or use Juicebox on the web. Detailed documentation is...SciLifeLab tutorial for bioinformatics analysis !
By Jit 3069 days agoscilifelab.github.io - SciLifeLab is a national center for molecular biosciences with focus on health and environmental research. Courses Old courses (2012-2014) Metagenomics Workshop 2015 November - Uppsala2016 November - Uppsala2017 November - Uppsala Introduction...wgd—simple command line tools for the analysis of ancient whole-genome duplications
By LEGE 2241 days agogithub.com - wgd is a easy to use command-line tool for KS distribution construction named wgd. The wgd suite provides commonly used KS and colinearity analysis workflows together with tools for modeling and visualization, rendering these...
