NIT, Rourkela, an institute of national importance under Ministry of HRD, Govt. of India invites applications from Indian nationals possessing excellent academic background along with commitment to quality teaching and research for faculty positions...
github.com - With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widely accepted and used to store somatic variants detected. The Cancer Genome Atlas Project has sequenced over 30 different cancers with sample size of each cancer type...
pevsnerlab.kennedykrieger.org - DRAGON: Database Referencing of Array Genes Online
SNOMAD: Standardization and Normalization of Microarray Data
SNPduo: SNP Analysis Between Two Individuals
SNPtrio: Analyzing and Visualizing and Inheritance Patterns in Trios
SNPscan: Data...
If we only had Illumina reads, we could also assemble these using the tool Spades.
You can try this here, or try it later on your own data.
Get data
We will use the same Illumina data as we used above:
illumina_R1.fastq.gz: the Illumina...
CSIR - Institute of Himalayan Bioresource Technology 2 vacancies of Project Fellow
Name of the Post: Project Fellow
No. of the Post: 02 Two
Salary: Rs. 12000/- per month or Rs. 14000/- per month
Age Limit: Max. 28 years as on 10.06.2015...
github.com - This tool extracts heterozygous kmer pairs from kmer count databases and performs gymnastics with them. We are able to disentangle genome structure by comparing the sum of kmer pair coverages (CovA + CovB) to their relative coverage (CovB / (CovA +...
As the cost of DNA sequencing has dropped, the volume of data produced has risen into the petabytes. Google is working with the genomics community to define a standard API for working with big genomic data sets in the cloud. Building on Google Cloud...
dbikard.github.io - https://dbikard.github.io/genomenotebook/
Install
pip install genomenotebook
How to use
Create a simple genome browser with a search bar. The sequence appears when zooming in.
import genomenotebook as gn
g=gn.GenomeBrowser(genome_path,...
Applications for Pre-selection of candidates under ‘Institutions Mode’ for DST-ISPIRE Faculty in Computational Biology/ Systems Biology/ Bioinformatics
Applications are invited for pre-selection of candidates for Ministry of Science and...
Mitochondrial genome assembly tools are specialized software and algorithms designed to accurately reconstruct the mitochondrial genome (mitogenome) from sequencing data, typically obtained through techniques like next-generation sequencing (NGS)....