BOL

software.broadinstitute.org - Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are designed to detect shared variation using data from multiple individuals.Genome STRiP...

omega.omicsbio.org - Omega found overlaps between reads using a prefix/suffix hash table. The overlap graph of reads was simplified by removing transitive edges and trimming short branches. Unitigs were generated based on minimum cost flow analysis of the overlap graph...

Department of Preventive and Social Medicine , JIPMER, Puducherry –605006 WALK-IN INTERVIEW JIP/PSM/INDO-US TB/ 2016/ Walk-in-interview for the following vacant posts funded by Department of Biotechnology, Govt.of India for the project...

github.com - Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...

Advt. No.: Maths./577/2016 Date: 12/08/2016 JRF Bioinformatics Job Position in Maulana Azad National Institute of Technology (MANIT) purely temporary basis Project Title : “Computational Approach to Study Complex Biological Network of Diseases...

github.com - MashMap is a fast and approximate software for mapping long reads (PacBio/ONT) or assembly to reference genome(s). It maps a query sequence against a reference region if and only if its estimated alignment identity is above a specified threshold. It...

cran.r-project.org - Most variant calling pipelines result in files containing large quantities of variant information. The variant call format (vcf) is an increasingly popular format for this data. The format of these files and their content is discussed in...

www.ncbi.nlm.nih.gov - RGFA, an implementation of the proposed GFA specification in Ruby. It allows the user to conveniently parse, edit and write GFA files. Complex operations such as the separation of the implicit instances of repeats and the merging of linear paths can...

Advt. No. NABI/8(18)/2012-PME-3 Project Scientist recruitment in National Agri-Food Biotechnology Institute (NABI) Project Title : “Transfer and Evaluation of Indian Banana with Pro-Vitamin A (PVA) Constructs” Essential qualifications: Ph.D....

github.com - MECAT is an ultra-fast Mapping, Error Correction and de novo Assembly Tools for single molecula sequencing (SMRT) reads. MECAT employs novel alignment and error correction algorithms that are much more efficient than the state of art of aligners and...