Jit
Enthusiast computational biologist with business dream !!!
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nQuire: a statistical framework for ploidy estimation using next generation sequencing
By Jit 2929 days agogithub.com - nQuire provides a statistical framework to study organisms with intraspecific variation in ploidy. nQuire is likely to be useful in epidemiological studies of pathogens, artificial selection experiments, and for historical or ancient samples where...Roslin Bioinformatics Group
Roslin Bioinformatics Group The Law group provides internal Institute-specific development, training and support roles for data manipulation, sequence analysis and any other aspect of the analysis of biological data using computer systems....AMStat: display statistics of large sequence files from next generation sequencing projects
By Neel 2892 days agosamstat.sourceforge.net - SAMStat is an efficient C program to quickly display statistics of large sequence files from next generation sequencing projects. When applied to SAM/BAM files all statistics are reported for unmapped, poorly and accurately mapped reads...PhD at University of Calgary
Institution/Company: University of Calgary Location: Calgary, AB Job Description: Novel diagnostic platform for detection of Osteoarthritis I invite applications from highly motivated individuals to join my laboratory as a PhD student...nQuire: A statistical framework for ploidy estimation using NGS short-read data
By Jit 2810 days agogithub.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...Postdoc positions in computational biology - Center for Genomic Science - Milan, Italy
Job Description: three postdoc positions in computational biology are available at the Center for Genomic Science in Milan (Italy): - Development of computational methods to investigate the interplay between epigenetic and genetic layers and...ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
By Neel 2459 days agogithub.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...EMBO practical Course on "Bioinformatics and Genomes Analyses" at Hellenic Pasteur Institute,...
The main objectives of this Practical Course are to strengthen skills of PhD students and young researchers in the domain of Bioinformatics and Genome Data Analyses on the use of advanced fundamental algorithms and their applications in genome...LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
By BioStar 2427 days agocsb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...Oldest Hominin DNA Sequenced
By Surajeet 4670 days agoMitochondrial Genome of a 400,000-Year-Old Hominin from Spain Decoded
