Shruti Paniwala
A Bioinformatician
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Junior Bioinformatic position
Junior Bioinformatic position in the laboratory of Inflammation and immunology in cardiovascular pathologies at Humanitas: We are seeking a highly motivated young PhD student with strong interest in high throughput data analysis. Detailed...Project Fellow @ National Institute of Malaria Research
National Institute of Malaria Research Sector 8, Dwarka, Delhi -110077 WALK IN INTERVIEW One position of project fellow is to be filled up in a DRL- funded research project on Molecular and morphological characterization of An. fluviatilis...HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome...
By BioStar 2390 days agogithub.com - HM2 can process any diploid assemblies, but it is especially suitable for diploid assemblies with high heterozygosity (≥3%), which can be difficult for other tools. This pipeline also implements flexible and sensitive assembly error detection, a...The Graveley Lab
Research in the Graveley lab is primarily focused on the regulation of alternative splicing and small RNA mediated gene regulation. These are fascinating and extraordinarily important mechanisms by which genes can be regulated. Our long-term goals...QUAST-LG: Versatile genome assembly evaluation
By Jit 2362 days agocab.spbu.ru - QUAST-LG-a tool that compares large genomic de novo assemblies against reference sequences and computes relevant quality metrics. Since genomes generally cannot be reconstructed completely due to complex repeat patterns and low coverage regions, we...Ph.D. student in Computational Systems Biology
Ph.D. student in Computational Systems Biology Location : The Luxembourg Centre for Systems Biomedicine (LCSB) at the University of Luxembourg, Luxembourg, Luxembourg Deadline for applications : unknown. Description : The Luxembourg Centre...Research Fellow @ Mendel laboratory
IRCCS Casa Sollievo della Sofferenza – Mendel laboratory is seeking one talented bioinformatician (Rome) Start date: immediate Duration: 1 year Funding Source: Institutional Salary on grant: B2 (€ 22.000/year gross) Contact Person...NovoGraph: building whole genome graphs from long-read-based de novo assemblies
By Jit 2340 days agogithub.com - NovoGraph: building whole genome graphs from long-read-based de novo assemblies An algorithmically novel approach to construct a genome graph representation of long-read-based de novo sequence assemblies. We then provide a proof of...Bioinformatics group at Boku University
The Bioinformatics group at Boku University has two main areas of interest, underpinning a common goal, the study of complex systems in living organisms. To overcome the engineered redundancies and combinatorial effects prevalent in higher...Purge Haplotigs: Pipeline to help with curating heterozygous diploid genome assemblies
By Rahul Nayak 2309 days agobitbucket.org - Some parts of a genome may have a very high degree of heterozygosity. This causes contigs for both haplotypes of that part of the genome to be assembled as separate primary contigs, rather than as a contig and an associated haplotig. This can be an...
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