Jit
Enthusiast computational biologist with business dream !!!
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LAPTI Lab
The main theme of our research is the understanding of how genetic information is decoded from DNA into RNA and proteins. Someone may find this topic a little strange and argue that we already know how this is happening. Translational recoding....genoPlotR - plot gene and genome maps project!
By Abhimanyu Singh 2642 days agogenoplotr.r-forge.r-project.org - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. Features Linear...AirLift, a methodology and tool for comprehensively moving mappings and annotations from one genome...
By Jit 2266 days agogithub.com - We propose AirLift, a methodology and tool for comprehensively moving mappings and annotations from one genome to another similar genome while maintaining the accuracy of a full mapper.Update Genome Workbench 2.7.15 released
By Surabhi Chaudhary 4392 days agoNCBI Genome Workbench updates with important bugs fixed.IVA: accurate de novo assembly of RNA virus genomes
By Neel 1718 days agogithub.com - IVA (Iterative Virus Assembler) designed specifically for read pairs sequenced at highly variable depth from RNA virus samples. We tested IVA on datasets from 140 sequenced samples from human immunodeficiency virus-1 or influenza-virus-infected...Comparative genomics visualisation tools !
By Neel 1479 days agocmdcolin.github.io - Comparative genomics visualisation tools !
Is reference genome necessary for gene expression study in transcriptome sequencing or for variant discovery in genome sequencing?
Rahul Agarwal 4616 days agoNuclear Dynamics Lab
Lab focus is to elucidate fundamental principles, new mechanisms, machineries and emergent properties that are involved in maintaining the genome and gene expression programmes for improvements in lifelong health and well-being for all. More at...Dynamic chromosome breakpoints !!!
By Jitendra Narayan 4224 days agoDuring recombination, the precise breakage of each strand, exchange between the strands, and sealing of the resulting recombined molecules happens. The “chromosomal breakpoints” refers to these places where they break.Nieduszynski Group
Complete, accurate replication of the genome is essential for life. All chromosomes in eukaryotic cells must be duplicated and then segregated to daughter cells to ensure genetic integrity and produce the large number of cells that make up a...
