Jit
Enthusiast computational biologist with business dream !!!
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Two postdoc positions to study multiscale genome evolution and cephalopod gene regulation...
Vienna Biocenter are seeking two postdoctoral researchers to join our team and work on the ERC funded project "METASCALE: Modes of genome evolution during major metazoan transitions". The task of both positions will be to study co-evolutionary...
Run miniasm assembler on nanopore reads !
Last updated 2533 days ago by Jit Comments (5)Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...-
Bioinformatics in Africa:- Part 1
Last updated 1393 days ago by BioStarThe Institut Pasteur de Côte d’Ivoire was created by the N°72511 law of July 27th, 1972 under the Presidency of his Excellency Felix Houphouët Boigny and Professor Jacques Monod, then Leading... Scallop: reference-based transcriptome assembler for RNA-seq
By Rahul Nayak 2392 days agogithub.com - Scallop is an accurate reference-based transcript assembler. Scallop features its high accuracy in assembling multi-exon transcripts as well as lowly expressed transcripts. Scallop achieves this improvement through a novel algorithm that can be...-
Bioinformatics in Africa: Part5 - Nigeria
Last updated 1387 days ago by BioStarCovenant University (CU)Ota:Covenant University (with her enriching and growing stateoftheart laboratories in the area of science and technology, arts, business and social sciences) is presently the Best University in... Wtdbg2: a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore
By Neel 2228 days agogithub.com - Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly output. Wtdbg2...RA Bioinformatics at Sir Ganga Ram Hospital, New Delhi
Opportunities available at Institute of Medical Genetics & Genomics, Sir Ganga Ram Hospital, New Delhi. 1) Senior Research Fellow under ICMR Project: M.Sc. (Life Sciences) with 2 years of experience (preferable in the field of Bioinformatics)...RePS: Repeat-masked Phrap with scaffolding, a WGS sequence assembler
By Jit 1786 days agoftp.genomics.org.cn - RePS (Repeat-masked Phrap with scaffolding), a WGS sequence assembler, that explicitly identifies exact kmer repeats from the shotgun data and removes them prior to the assembly. The established software Phrap is used to compute meaningful error...Nigerian Bioinformatics and Genomics Network (NBGN)
This is to announce the second official conference of the Nigerian Bioinformatics and Genomics Network (NBGN). October 11-13,2021 at Landmark University, Omu-Aran, Kwara State and Zoom ( conference link to be announced...
