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Circlator: automated circularization of genome assemblies using long sequencing reads
By Poonam Mahapatra 2366 days agosanger-pathogens.github.io - A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript. Citation: "Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology...EMBL Postdoc position in Bacterial Gene Gain Loss
A post-doctoral fellowship is available in the research groups of Nick Goldman (EBI) and John Welch (Genetics Department, Cambridge University) under the EMBL-EBI / Cambridge Computational Biomedical Postdoctoral Fellowship scheme. The project is...PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++.
By Surabhi Chaudhary 2339 days agoderisilab.ucsf.edu - We are pleased to release PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++. Its name describes the strategy that it implements for genome assembly: PRICE uses paired-read information to iteratively...Mike Ritchie Lab
Mike Ritchie Lab primary research focus is the detection of susceptibility genes for common diseases such as cancer, diabetes, hypertension, and cardiovascular disease, among others. The approaches will involve the development and application of new...Research Associate @ ICGEB, New Delhi.
Applications are invited for Research Associate position in the DBT Sponsored Bioinformatics Infrastructure Facility at ICGEB, New Delhi. Essential requirements: Experience of using bioinformatics tools. Experience of working in Linux. Basic...SRF/JRF/RA @ UNIVERSITY OF HYDERABAD
SCHOOL OF CHEMISTRY, UNIVERSITY OF HYDERABAD Applications on plain paper along with details of CV (relevant photocopies of their qualifications/experience and reprints of published work to be attached) are invited from qualified candidates for...GFinisher: a new strategy to refine and finish bacterial genome assemblies
By Jit 2294 days agogfinisher.sourceforge.net - GFinisher is an application tools for refinement and finalization of prokaryotic genomes assemblies using the bias of GC Skew to identify assembly errors and organizes the contigs/scaffolds with genomes references. java -Xms2G -Xmx4G -jar...Research Fellow in Bioinformatics @ Queen's University Belfast -Institute for Global Food...
Ref: 13/102900 Available immediately until 30th November 2015, to work on the development of bioinformatics approaches to aid analysis of data derived from the metabolomic profiling of biological matrices. The successful applicant will lead...JRF @ NATIONAL JALMA INSTITUTE OF LEPROSY AND OTHER MYCOBACTERIAL DISEASES
NATIONAL JALMA INSTITUTE OF LEPROSY AND OTHER MYCOBACTERIAL DISEASES (INDIAN COUNCIL OF MEDICAL RESEARCH) P.O BOX 101, Dr. M. Miyazaki Marg, Tajganj, Agra - 282001 Applications are invited for a walk-in interview to be held in the Seminar...MITOS: improved de novo metazoan mitochondrial genome annotation
By Jit 2202 days agomitos.bioinf.uni-leipzig.de - Allows automatic annotation of metazoan mitochondrial genomes. MITOS is a pipeline designed to compute a consistent de novo annotation of the mitogenomic sequences. The software allows for a systematic error screening, the standardisation of gene...
