Jit
Enthusiast computational biologist with business dream !!!
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Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
By BioStar 2434 days agogithub.com - Rcorrector has an accuracy higher than or comparable to existing methods, including the only other method (SEECER) designed for RNA-seq reads, and is more time and memory efficient. With a 5 GB memory footprint for 100 million reads, it can be run...Bioinformatics Trainee at University of Kalyani
Bioinformatics Trainee Eligibility : MSc Location : Kolkata Last Date : 28 Dec 2015 Hiring Process : Walk - In University of Kalyani Bioinformatics Trainee Job position in University of Kalyani Number of Posts : 02 Qualification : M.Sc....HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from...
By BioStar 2382 days agogithub.com - HiCanu, a significant modification of the Canu assembler designed to leverage the full potential of HiFi reads via homopolymer compression, overlap-based error correction, and aggressive false overlap filtering. More...Chekulaevalab
Focusing on understanding the molecular mechanisms that regulate mRNA translation, localization and stability and role of non-coding RNAs in this process. Up to 90% of human DNA is estimated to be transcribed into so called non-coding RNAs that are...Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
By Jit 2111 days agogithub.com - Hifiasm is a fast haplotype-resolved de novo assembler for PacBio Hifi reads. It can assemble a human genome in several hours and works with the California redwood genome, one of the most complex genomes sequenced so far. Hifiasm can produce...RA at University of Pune
Research Associate Job vacancies in University of Pune on temporary basis No. of Post : 01 Department : Science and Technology Qualifications : Ph.D. with specialization in Bioinformatics/Machine Learning/ Mathematical Biology/...Bioinformatics tools for telomere to telomere assembly !
By BioStar 1874 days agooptimize HiFi readsQuorUM: An Error Corrector for Illumina Reads
By Jit 3252 days agojournals.plos.org - Illumina Sequencing data can provide high coverage of a genome by relatively short (most often 100 bp to 150 bp) reads at a low cost. Even with low (advertised 1%) error rate, 100 × coverage Illumina data on average has an error in some read...QuorUM: An Error Corrector for Illumina Reads
By BioStar 2434 days agowww.genome.umd.edu - We produce trimmed and error-corrected reads that result in assemblies with longer contigs and fewer errors. We compared QuorUM against several published error correctors and found that it is the best performer in most metrics we use. QuorUM is...Project Fellow Bioinformatics at Central University of Himachal Pradesh
Project Fellow Bioinformatics Eligibility : MSc(Bio-Chemistry, Bio-Informatics) Location : Kulu Last Date : 07 Mar 2016 Hiring Process : Face to Face Interview Central University of Himachal Pradesh Project Fellow Bioinformatics Job...
