Jit
Enthusiast computational biologist with business dream !!!
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INC-Seq: accurate single molecule reads using nanopore sequencing
By Jit 2556 days agogithub.com - INC-Seq reads enabled accurate species-level classification, identification of species at 0.1 % abundance and robust quantification of relative abundances, providing a cheap and effective approach for pathogen detection and microbiome profiling...Research Associate Bioinformatician @ University of Bristol
This 0.5 fte role will have specific responsibility for the bioinformatic side of a Health Innovation Challenged Fund (HICF) research project investigating the application of Next Generation Sequencing (NGS) technologies to the analysis of Minimal...Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By Jit 2397 days agogithub.com - Flye is a de novo assembler for long and noisy reads, such as those produced by PacBio and Oxford Nanopore Technologies. The algorithm uses an A-Bruijn graph to find the overlaps between reads and does not require them to be error-corrected. After...RA Bioinformatics at IISR
Bioinformatics Research Associate at Indian Institute of Spice Research Pay Scale: Rs. 40,000/-per month +HRA (as admissible) for Ph.D. holders and Rs. 38,000/-p.m. + HRA (as admissible) for Master degree holder Qualifications: a)Essential...Cerulean: A hybrid assembly using high throughput short and long reads
By Rahul Nayak 2366 days agosourceforge.net - Cerulean extends contigs assembled using short read datasets like Illumina paired-end reads using long reads like PacBio RS long reads. Cerulean v0.1 has been implemented with bacterial genomes in mind. The method is fully described in...Bioinformatics Project Assistant at Vector Control Research Centre (VCRC), Puducherry.
Applications are invited upto 27.07.2015 for filling up of one post of Project Assistant (UNRESERVED) to work under ICMR funded Non-Institutional adhoc project entitled “Biomedical Informatics centre’s of ICMR” at Vector Control Research Centre...Hercules: a profile HMM-based hybrid error correction algorithm for long reads
By Jit 2289 days agogithub.com - Choosing whether to use second or third generation sequencing platforms can lead to trade-offs between accuracy and read length. Several studies require long and accurate reads including de novo assembly, fusion and structural variation detection....Bioinformatics Scientist at NIN
No.NIN/PERS/Sch-88/2015-16/ WALK-IN-INTERVIEW (EMPLOYMENT NOTIFICATION) Eligible candidates are invited to apply for the following post on the ad hoc research project entitled “Biomedical Informatics Centre’s of ICMR” - funded by ICMR at this...Rebaler: program for conducting reference-based assemblies using long reads.
By Jit 2261 days agogithub.com - Rebaler is a program for conducting reference-based assemblies using long reads. It relies mainly on minimap2 for alignment and Racon for making consensus sequences. I made Rebaler for bacterial genomes (specifically for the...Five key traits to seek out in potential bioinformatics candidates !!!
By Jit 3395 days agoOnce your research group is ready to make a larger investment and hire a bioinformatician to gain a competitive edge, there are several key traits to seek out in potential candidates. The best bioinformatician are:-
