Jit
Enthusiast computational biologist with business dream !!!
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Baumbach Lab
The Computational Biology research group was established in October 2012 at the Department of Mathematics and Computer Science (IMADA) at the University of Southern Denmark (SDU). It emerged from the Computational Systems Biology group, founded in...Tools to detect synteny blocks regions among multiple genomes
By Jitendra Narayan 4086 days ago Comments (24)Collections of synteny detection tools and related materialsLook up a biological numbers
By Jitendra Narayan 4111 days agobionumbers.hms.harvard.edu - Did you ever need to look up a number like the volume of a cell or the cellular concentration of ATP, only to find yourself spending much more time than you wanted on the Internet or flipping through textbooks - all without much...VGSC: A Web-Based Vector Graph Toolkit of Genome Synteny and Collinearity
By Abhimanyu Singh 2217 days agowww.ncbi.nlm.nih.gov - VGSC, the Vector Graph toolkit of genome Synteny and Collinearity, and its online service, to visualize the synteny and collinearity in the common graphical format, including both raster (JPEG, Bitmap, and PNG) and vector graphic (SVG, EPS, and...SynVisio: An Interactive Multiscale Synteny Visualization Tool for McScanX.
By Jit 1638 days agosynvisio.github.io - SynVisio lets you explore the results of McScanX a popular synteny and collinearity detection toolkit and generate publication ready images. SynVisio requires two files to run: The simplified gff file that was used as an...Chang lab
The Chang lab is focused on how the activities of hundreds or even thousands of genes (gene parties) are coordinated to achieve biological meaning. We have pioneered methods to predict, dissect, and control large-scale gene regulatory programs;...flexidot: Highly customizable, ambiguity-aware dotplots for visual sequence analyses
By Jit 1675 days agogithub.com - FlexiDot is a cross-platform dotplot suite generating high quality self, pairwise and all-against-all visualizations. To improve dotplot suitability for comparison of consensus and error-prone sequences, FlexiDot harbors routines for strict and...Genetics for Fun and Profit: Andrew Hessel at TEDxVilnius
By Jit 4101 days agoAndrew Hessel co-chairs the Bioinformatics and Biotechnology track at the Singularity University, an institution founded by futurist Ray Kurzweil and X Prize Foundation CEO Peter Diamandis, with sponsorship from world-leading organizations that...JCVI utility libraries
By Jit 1295 days agogithub.com - Collection of Python libraries to parse bioinformatics files, or perform computation related to assembly, annotation, and comparative genomics.
