Jit
Enthusiast computational biologist with business dream !!!
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Tbl2asn: a command-line program that automates the creation of sequence records for submission to...
By Poonam Mahapatra 3303 days agowww.ncbi.nlm.nih.gov - Tbl2asn is a command-line program that automates the creation of sequence records for submission to GenBank. It uses many of the same functions as Sequin but is driven generally by data files. Tbl2asn generates .sqn files for submission to GenBank....Assistant Professor - Computational Biology and Bioinformatics in Navi Mumbai
No. ACTREC / ADVT-A/2/2015 Pay in Pay band and Grade Pay : PB-3 (Rs 15,600-39,100) Pay in pay band Rs 21,900+ G.P. of Rs 7,600 Total emoluments = 82,000/- p.m. & nbsp Educational Qualification : Ph.D. or MD/Ph.D. Experience : Post MD /...
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
Last updated 3141 days ago by Abhimanyu Singh Comments (1)kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rapid determination of read compatibility with targets) Software (C++) https://pachterlab.github.io/kallisto/ Sailfish Estimation of isoform abundances...ArrayGen Next Generation Genome Browser Coming Soon !!!
By ArrayGen Technologies 3846 days agoArrayGen Technologies - www.arraygen.comMany-to-many pairwise alignments of two sequence sets
By Poonam Mahapatra 2917 days agoemboss.sourceforge.net - needleall reads a set of input sequences and compares them all to one or more sequences, writing their optimal global sequence alignments to file. It uses the Needleman-Wunsch alignment algorithm to find the optimum alignment (including gaps) of two...SRF/JRF Bioinformatics at CIARI
Realizing the importance of Island Agriculture to meet the requirements of local population and tourists, Indian Council of Agricultural research (ICAR) established Central Island Agricultural Research Institute, Port Blair on June 23rd, 1978 by...Post-doc position at LABGeM - Evry, France
The LABGeM team (CEA/Genoscope, CNRS UMR 8030, France, Dir. Claudine Médigue) is developing integrated approaches which combines bioinformatics methods based (i) on genomic and metabolic contexts, (ii) on an orignal metabolic network representation...MSAProbs - Parallel and accurate multiple sequence alignment
By Neel 2531 days agomsaprobs.sourceforge.net - MSAProbs is a well-established state-of-the-art multiple sequence alignment algorithm for protein sequences. The design of MSAProbs is based on a combination of pair hidden Markov models and partition functions to calculate posterior...Microscope
By Jitendra Narayan 3754 days agomicroscope.readthedocs.org - Microscope Platform user documentation. The MicroScope platform is available at this URL: https://www.genoscope.cns.fr/agc/microscopeShouji: a fast and efficient pre-alignment filter for sequence alignment
By Jit 2414 days agogithub.com - The ability to generate massive amounts of sequencing data continues to overwhelm the processing capacity of existing algorithms and compute infrastructures. In this work, we explore the use of hardware/software co-design and hardware acceleration...
