Abhimanyu Singh
A bioinformatics beginner
Our Sponsors
Related items
GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 2845 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...JRF / Project Assistant Recruitment at Shillong – Bioinformatics Centre (DIC)
3 Vacancies at Bioinformatics Centre (DIC) For M.Tech/M.Sc. Degree Candidates. Apply Before 15th February,2015 Bioinformatics Centre (DIC) invites applications for the following posts: Job Number: 01 Job Designation: Junior Research Fellow...FinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
By Jit 2758 days agogithub.com - Here is the command to run the tool: python finisherSC.py destinedFolder mummerPath If you are running on server computer and would like to use multiple threads, then the following commands can generate 20 threads to run FinisherSC. python...Bioinformatics PhDs - Cover Letter
By Martin Jones 4039 days ago Comments (1)The reception your cover letter will receive is more varied and unpredictable than the other elements of your application packet.LoRMA: A tool for correcting sequencing errors in long reads
By Abhimanyu Singh 2741 days agogite.lirmm.fr - An error correction method that uses long reads only. The method consists of two phases: first, we use an iterative alignment-free correction method based on de Bruijn graphs with increasing length of k-mers, and second, the corrected reads are...Wtdbg2: a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore
By Neel 2698 days agogithub.com - Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly output. Wtdbg2...
A guide for complete R beginners :- R Syntax
Last updated 4030 days ago by Archana MalhotraR is a functional based language, the inputs to a function, including options, are in brackets. Note that all dat and options are separated by a comma Function(data, options) Even quit is a function q() So is...SViper: Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact...
By Neel 2269 days agogithub.com - Call sviper ~$ ./sviper -s short-reads.bam -l long-reads.bam -r ref.fa -c variants.vcf -o polished_variants This will output a polished_variants.vcf file, that contains all the refined variants. Sometimes it is helpful to look at the...Asst. Professor at Central University of Jharkhand (CUJ)
Central University of Jharkhand (CUJ) has issued a recruitment notification for the recruitment of Assistant Professor through recruitment notification – Central University of Jharkhand (CUJ) Recruitment 2015 – Advt. No.: CUJ/Advt./14-15/15 Date:...
