Abhimanyu Singh
A bioinformatics beginner
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A guide for complete R beginners :- R Syntax
Last updated 4245 days ago by Archana MalhotraR is a functional based language, the inputs to a function, including options, are in brackets. Note that all dat and options are separated by a comma Function(data, options) Even quit is a function q() So is...miniasm: very fast OLC-based de novo assembler for noisy long reads
By Jit 3238 days agogithub.com - Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...Asst. Professor at Central University of Jharkhand (CUJ)
Central University of Jharkhand (CUJ) has issued a recruitment notification for the recruitment of Assistant Professor through recruitment notification – Central University of Jharkhand (CUJ) Recruitment 2015 – Advt. No.: CUJ/Advt./14-15/15 Date:...ALPACA: A hybrid strategy for assembly of genomic DNA shotgun sequencing reads.
By Seema Singh 3085 days agogithub.com - ALPACA requires Celera Assembler 8.3 or later. It is recommended to build Celera Assembler from source. (Why? The pre-built binaries CA_8.3rc1 and CA8.3rc2 will work for any large data set. Detail paper...RA Bioinformatics at Ch. Charan Singh University, Meerut
Ch. Charan Singh University, Meerut http://molbiolabccsumrt.webs.com/ Applications are invited for one post of RA in a DBT funded research project “Creation of Bioinformatics Infrastructure Facility (BIF) for the promotion of Biology Teaching...GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 3059 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...Coding Ground
By Jitendra Narayan 4225 days agowww.tutorialspoint.com - Online coding group for most of the programming languages. Code in almost all popular languages using Coding Ground. Edit, compile, execute and share your projects, 100% cloud. http://www.tutorialspoint.com/codingground.htmFinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
By Jit 2973 days agogithub.com - Here is the command to run the tool: python finisherSC.py destinedFolder mummerPath If you are running on server computer and would like to use multiple threads, then the following commands can generate 20 threads to run FinisherSC. python...Bioinformatics Project Assistant at NITW
NATIONAL INSTITUTE OF TECHNOLOGY WARANGAL – 506 004 DEPARTMENT OF BIOTECHNOLOGY No. NITW/Bio/ Date: 30th March 2015 ADVERTISEMENT FOR PROJECT FELLOW (Research Staff) Applications are invited for the post of Project Fellow (Research...LoRMA: A tool for correcting sequencing errors in long reads
By Abhimanyu Singh 2955 days agogite.lirmm.fr - An error correction method that uses long reads only. The method consists of two phases: first, we use an iterative alignment-free correction method based on de Bruijn graphs with increasing length of k-mers, and second, the corrected reads are...
