Jit
Enthusiast computational biologist with business dream !!!
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DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
By Jit 1349 days ago Comments (1)github.com - DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that its accuracy and performance is comparable to existing tools...ACANA: An accurate and consistent alignment tool for DNA sequences
By Jit 2545 days agowww.niehs.nih.gov - ACANA is an accurate and consistent alignment tool for DNA sequences. ACANA is specifically designed for aligning sequences that share only some moderately conserved regions and/or have a high frequency of long insertions or deletions. It attempts...A web-based tool for sequence alignment statistics and innovative visualization
By BioStar 234 days agobioinformatics.um6p.ma - AlignStatPlot, a new R package and online tool that is well-documented and easy-to usefor MSA and post-MSA analysis. This tool performs both traditional and cutting-edge analy-ses on sequencing data and generates new visualisation methods for MSA...GRSR: a tool for deriving genome rearrangement scenarios from multiple unichromosomal genome...
By Jit 2249 days agogithub.com - GRSR is a Tool for Deriving Genome Rearrangement Scenarios for Multiple Uni-chromosomal Genomes. This tool will do the following steps: Step 1. Run mugsy to get multiple sequence alignment results. Step 2 & 3. Extraction of the Coordinates...destruct
By Jitendra Prajapati 3190 days agobitbucket.org - Destruct is a tool for joint prediction of rearrangement breakpoints from single or multiple tumour samples. More at https://bitbucket.org/dranew/destructScientist - Computational Genomics (Two Positions)
ICRISAT is a non-profit, non-political organization that conducts agricultural research for development in Asia and sub-Saharan Africa with a wide array of partners throughout the world. Covering 6.5 million square kilometers of land in 55...RNA-Seq De novo Assembly Using Trinity
By Surabhi Chaudhary 3168 days agogithub.com - Trinity, developed at the Broad Institute and the Hebrew University of Jerusalem, represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules:...Wellcome Trust/DBT India Alliance Margdarshi Fellowships 2016
The Wellcome Trust/DBT India Alliance invites application for the Margdarshi Fellowship scheme. The scheme provides a unique opportunity for visionary biomedical scientists to lead and nucleate a cutting edge research program in India in...PhyloGrapher - Graph Visualization Tool
By Jitendra Prajapati 3153 days agowww.atgc.org - PhyloGrapher is a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements).PhyloGrapher is a drawing tool that generates custom graphs for a given set of elements. In...Ph.D. Programme in Computational Biology
Ph.D. Programme in Computational Biology For students interested in frontier research at the interface of biology, computation, physics and applied mathematics IMSc is a leader in India in fundamental research in theoretical physics,...
