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Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
By Rahul Nayak 2220 days agosourceforge.net - Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced seed method. Then, Rainbow implements a heterozygote calling like...Memories Can Be Passed Down Through DNA
By Radha Agarkar 3842 days agoThe premise of Assassin's Creed is the reliving of other people's memories stored inside DNA. Well scientists have found that in mice, it actually happens! Anthony is joined by special guest and our friend Tara Long from Hard Science to explain how...Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
By BioStar 1746 days agogithub.com - Rcorrector has an accuracy higher than or comparable to existing methods, including the only other method (SEECER) designed for RNA-seq reads, and is more time and memory efficient. With a 5 GB memory footprint for 100 million reads, it can be run...Bioinformatics JRF/SRF position at NATIONAL RESEARCH CENTRE ON PLANT BIOTECHNOLOGY
NATIONAL RESEARCH CENTRE ON PLANT BIOTECHNOLOGY LBS, CENTRE, PUSA CAMPUS, IARI NEW DELHI NEW DELHI – 110 012 WALK- IN –INTERVIEWS Eligible candidates may appear in Walk-in-Interview on May 23, 2014 at 10 AM for the posts of Research...SqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
By BioStar 1552 days agogithub.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...A History of Bioinformatics (in the Year 2039)
By Martin Jones 3769 days agoC. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2039Scientists map 17,294 proteins produced in human body
By Jit 3824 days ago17,294 proteins mapped in 30 organs of human bodySqueezeMeta: a fully automated metagenomics pipeline, from reads to bins
By BioStar 133 days agogithub.com - SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. SqueezeMeta includes multi-metagenome support allowing the co-assembly of related metagenomes and the retrieval of individual genomes...QuorUM: An Error Corrector for Illumina Reads
By BioStar 1746 days agowww.genome.umd.edu - We produce trimmed and error-corrected reads that result in assemblies with longer contigs and fewer errors. We compared QuorUM against several published error correctors and found that it is the best performer in most metrics we use. QuorUM is...Genomics and Personalized Medicine Breakthroughs
By Rahul Nayak 3820 days agohttp://bit.ly/e8QGzY Human genome mapping is now enabling a breakthrough in medical innovation -- personalized medicine. What does this mean for patients? We can now identify predispositions to disease, predict how we metabolize drugs, and figure...
