Jit
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FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads
By Jit 2231 days agobioinfo.ut.ee - FastGT is a program package for whole-genome genotyping of genome variants directly from raw sequencing reads. It is written in C and runs in Linux. FastGT uses a list of variant-specific k-mer pairs that are unique in human genome, counts the...Genomics and Personalized Medicine
By Rahul Nayak 4297 days ago(October 20, 2009) Michael Snyder, Professor of Genetics and Chair of the Department of Genetics at Stanford, discusses advances in gene sequencing, the impact of genomics on medicine, the potential for personalized medicine. and efforts at Stanford...Filtlong: quality filtering tool for long reads
By Radha Agarkar 2125 days agogithub.com - Filtlong is a tool for filtering long reads by quality. It can take a set of long reads and produce a smaller, better subset. It uses both read length (longer is better) and read identity (higher is better) when choosing which reads pass the...Adhoc Bioinformatics Faculty Position @ NIT
NATIONAL INSTITUTE OF TECHNOLOGY, DEPARTMENT OF BIOTECHNOLOGY, WARANGAL – 506 021, Andhra Pradesh No.NITW/BT/2014/adhoc APPLICATIONS ARE INVITED FOR THE APPOINTMENT OF ADHOC FACULTY ON CONTRACT BASIS IN THE DEAPARTMENT OF...FastProNGS: fast preprocessing of next-generation sequencing reads
By Rahul Nayak 1898 days agogithub.com - FastProNGS to integrate the quality control process with automatic adapter removal. Parallel processing was implemented to speed up the process by allocating multiple threads. Compared with similar up-to-date preprocessing tools, FastProNGS is by...Faculty post at Zhejiang University
Zhejiang University (ZJU) is seeking faculty candidates for its newly launched, highly competitive and well funded “Hundred Talents Program”. This search covers all colleges and departments at ZJU. Applicants, expected to be about 35 years old,...HairSplitter: assembling long reads in an unknown number of haplotypes
By BioStar 1187 days agohal.archives-ouvertes.fr - Pros and cons of HairSplitter Limitations of HairSplitter: Not very fast: it re-polishes the whole assembly Limited in the number of haplotypes Strengths of HairSplitter: Very modular, can be used with any assembler Naive: makes no...XAMPP: Starting Apache fail Ubuntu
By Ram Yash Pal 4292 days ago Comments (1)Just press Ctrl+Alt+T on your keyboard to open Terminal. When it opens, run the command(s) below:Jabba: Hybrid Error Correction for Long Sequencing Reads
By Jit 2984 days agogithub.com - Jabba is a hybrid error correction tool to correct third generation (PacBio / ONT) sequencing data, using second generation (Illumina) data. Input Jabba takes as input a concatenated de Bruijn graph and a set of sequences: the de Bruijn graph...Genomic Medicine - Bruce Korf (2014)
By Neel 4275 days agoMay 21, 2014 - Current Topics in Genome Analysis 2014 A lecture series covering contemporary areas in genomics and bioinformatics. More: http://www.genome.gov/COURSE2014
