Radha Agarkar
A Bioinformatician
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Junior Research Fellowship at G.B. PANT UNIVERSITY
DEPARTMENT OF MOLECULAR BIOLOGY & GENETIC ENGINEERING COLLEGE OF BASIC SCIENCE AND HUMANITIES G.B. PANT UNIVERSITY OF AGRICULTURE AND TECHNOLOGY PANTNAGAR -263145, UTTARAKHAND No. CBSH/MBGE/356 Subject: Advertisement for the award of...
Frequent Paired-end reads (PE 2x100) mapping command lines
Last updated 2432 days ago by Jitbowtie2 -x hs37m -X 650 -q -1 r1.fq -2 r2.fq -S r12.bowtie2.sam bwa aln hs37m.fa r1.fq > r1.sai && bwa aln hs37m.fa r2.fq > r2.sai \ && bwa sampe hs37m r1.sai r2.sai r1.fq r2.fq > r12.bwa.sam bwa bwasw...Bioinformatics JRF/SRF position at University of Hyderabad
UNIVERSITY OF HYDERABAD SCHOOL OF LIFE SCIENCES Applications are invited from qualified individuals for a JRF/SRF position (sponsored by DBT/DST) at Prof. Jagan Pongubala’s laboratory, University of Hyderabad. Dr. Pongubala’s laboratory is...GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 2422 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...JRF at Bose Institute, Kolkata
ADVT. No. S/BIC/01/2014-15 Bose Institute, Kolkata, invites applications from Indian Citizens for ONE (01) temporary position of Junior Research Fellow in the DBT sponsored project entitled, “Centre of Excellance (CoE) in Bioinformatics at Bose...ReMILO: reference assisted misassembly detection algorithm using short and long reads.
By Jit 2381 days agogithub.com - ReMILO, a reference assisted misassembly detection algorithm that uses both short reads and PacBio SMRT long reads. ReMILO aligns the initial short reads to both the contigs and reference genome, and then constructs a novel data structure called...Research fellow (PhD candidate) in computational biology – 2 positions
At the Department of Informatics two 4-year positions as research fellow are available in the field of computational biology connected to the Computational Biology Unit. The positions are linked to the project “Integrated genomics - linking...SimLoRD: A read simulator for third generation sequencing reads
By Aaryan Lokwani 2333 days agobitbucket.org - SimLoRD is a read simulator for third generation sequencing reads and is currently focused on the Pacific Biosciences SMRT error model. Reads are simulated from both strands of a provided or randomly generated reference sequence. The reference...Bioinformatician stuck in wet-lab
By Rahul Agarwal 3902 days ago Comments (1)biomickwatson.wordpress.com - This guide is aimed at pet bioinformaticians, and is meant to guide them towards better career development. 1. Make friends with local bioinformatics groups 2. Talk to your computing group 3. Obtain clear expectations 4. Rewrite your job...PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the...
By BioStar 2303 days agogithub.com - Development packages for zlib and libbz2 are needed, as well as a standard compiler environment. On Ubuntu, this can be installed via: sudo apt-get install build-essential libtool automake zlib1g-dev libbz2-dev pkg-config On MacOS, the Apple...
