BOL

eugi.bi.up.ac.za - swgis v2.0 is the modified version of the seqword genomic island sniffer. this version is specifically optimized for predicting genomic islands in eukaryotic genomes. swgis v2.0 was tested on several eukaryotic species of different lineages....

Efflux pumps (RND family) Functioning of efflux systems in Gram-negative bacteria Determinants of the compound-efflux system interactions Action of inhibitors on efflux systems Structural and dynamical features of the efflux...

github.com - NovoGraph: building whole genome graphs from long-read-based de novo assemblies An algorithmically novel approach to construct a genome graph representation of long-read-based de novo sequence assemblies. We then provide a proof of...

Broad area of research: Genome Annotation and Functional Genomics Bergman Lab is actively engaged in the development and application of computational methods to improve the annotation of functional biological features in genome sequences....

github.com - ARCS requires two input files: Draft assembly fasta file Interleaved linked reads file (Barcode sequence expected in the BX tag of the read header or in the form "@readname_barcode" ; Run Long Ranger basic on raw chromium reads to...

Creators of software widely used in computational biology discuss the factors that contributed to their success

github.com - LTR_retriever is a command line program (in Perl) for accurate identification of LTR retrotransposons (LTR-RTs) from outputs of LTRharvest, LTR_FINDER, and/or MGEScan-LTR and generating non-redundant LTR-RT library for genome annotations. By...

Indian Statistical Institute Kolkata invites applications for the following posts 2013 Oct Advertisement from Indian Statistical Institute Post: Network Analysis No. of Positions: 01 Educational Qualifications: Candidate should have...

In our research, we combine computational methods with an experimental component in a unified effort to develop comprehensive descriptions of genetic systems of cellular controls, including those whose malfunctioning becomes the basis of genetic...

Scientists have reconstructed the genome of an ancient human who lived nearly 5,700 years ago in Southern Denmark from the birch pitch- an ancient tar-like substance.