Jit
Enthusiast computational biologist with business dream !!!
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InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
By Jit 1301 days agogithub.com - InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs, allele-specific...Bergman Lab
Broad area of research: Genome Annotation and Functional Genomics Bergman Lab is actively engaged in the development and application of computational methods to improve the annotation of functional biological features in genome sequences....RagTag: a collection of software tools for scaffolding and improving modern genome assemblies
By Jit 1172 days agogithub.com - RagTag is a collection of software tools for scaffolding and improving modern genome assemblies. Tasks include: Homology-based misassembly correction Homology-based assembly scaffolding and patching Scaffold mergingThe anatomy of successful computational biology software
By Jitendra Narayan 4064 days agoCreators of software widely used in computational biology discuss the factors that contributed to their successPLAR: Pipeline for lncRNA annotation from RNA-seq data
By Abhi 1053 days agowww.weizmann.ac.il - Due to several requests, we are releasing an assingment of orthologs, determined using the same methods used in Hezroni et al. (BLAST, Whole Genome Alignment (WGA), and synteny). One is comparing human GENCODE genes (from GENCODE v30) to lncRNAs...Network Analysis @ Indian Statistical Institute
Indian Statistical Institute Kolkata invites applications for the following posts 2013 Oct Advertisement from Indian Statistical Institute Post: Network Analysis No. of Positions: 01 Educational Qualifications: Candidate should have...Comparative genomics visualisation tools !
By Neel 1012 days agocmdcolin.github.io - Comparative genomics visualisation tools !Troyanskaya Lab
In our research, we combine computational methods with an experimental component in a unified effort to develop comprehensive descriptions of genetic systems of cellular controls, including those whose malfunctioning becomes the basis of genetic...GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
By Neel 921 days agogithub.com - The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is...Assistant Professor in Molecular Synthesis for Drug Discovery and Development @ CBMR, Lucknow
ADVERTISEMENT FOR FACULTY POSITIONS AT CENTRE OF BIOMEDICAL RESEARCH (CBMR), LUCKNOW Details of the Positions and Pay Structure: 03 Posts for Assistant Professor in Molecular Synthesis for Drug Discovery and Development Essential...
