Jit
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RagTag: a collection of software tools for scaffolding and improving modern genome assemblies
By Jit 1172 days agogithub.com - RagTag is a collection of software tools for scaffolding and improving modern genome assemblies. Tasks include: Homology-based misassembly correction Homology-based assembly scaffolding and patching Scaffold mergingThe anatomy of successful computational biology software
By Jitendra Narayan 4064 days agoCreators of software widely used in computational biology discuss the factors that contributed to their successPLAR: Pipeline for lncRNA annotation from RNA-seq data
By Abhi 1053 days agowww.weizmann.ac.il - Due to several requests, we are releasing an assingment of orthologs, determined using the same methods used in Hezroni et al. (BLAST, Whole Genome Alignment (WGA), and synteny). One is comparing human GENCODE genes (from GENCODE v30) to lncRNAs...Network Analysis @ Indian Statistical Institute
Indian Statistical Institute Kolkata invites applications for the following posts 2013 Oct Advertisement from Indian Statistical Institute Post: Network Analysis No. of Positions: 01 Educational Qualifications: Candidate should have...Comparative genomics visualisation tools !
By Neel 1012 days agocmdcolin.github.io - Comparative genomics visualisation tools !Troyanskaya Lab
In our research, we combine computational methods with an experimental component in a unified effort to develop comprehensive descriptions of genetic systems of cellular controls, including those whose malfunctioning becomes the basis of genetic...GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
By Neel 921 days agogithub.com - The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is...Assistant Professor in Molecular Synthesis for Drug Discovery and Development @ CBMR, Lucknow
ADVERTISEMENT FOR FACULTY POSITIONS AT CENTRE OF BIOMEDICAL RESEARCH (CBMR), LUCKNOW Details of the Positions and Pay Structure: 03 Posts for Assistant Professor in Molecular Synthesis for Drug Discovery and Development Essential...PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data
By Abhi 447 days agogithub.com - Phylogenomic Analysis Pipeline for Herbarium Specimens What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant materials. The outcomes include the plastid genome (plastome) assemblies,...Junior Bioinformatic position
Junior Bioinformatic position in the laboratory of Inflammation and immunology in cardiovascular pathologies at Humanitas: We are seeking a highly motivated young PhD student with strong interest in high throughput data analysis. Detailed...
